Aniseed - Gene card

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Genoscope Yasuo Villefranche

92 results

AHC0AAA39YP14

Plate: Plate_39_P14

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
Nucleotide-bd_a/b_plait_sf	Gene3D	Nucleotide-binding alpha-beta plait domain superfamily
RBD_domain_sf	SUPERFAMILY	RNA-binding domain superfamily
RRM_dom	SMART	RNA recognition motif domain
RRM_dom	Pfam	RNA recognition motif domain
RRM_dom	ProSiteProfiles	RNA recognition motif domain

GOSlim

29 results

GO Term	Annotation Origin	Type
angiogenesis	Orthology	biological process
nucleic acid binding	Orthology	molecular function
DNA binding	Orthology	molecular function
RNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
nucleolus	Orthology	cellular component
cytoplasm	Orthology	cellular component
protein C-terminus binding	Orthology	molecular function
membrane	Orthology	cellular component
nuclear speck	Blast	cellular component
identical protein binding	Orthology	molecular function
cell projection	Blast	cellular component
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
extracellular exosome	Orthology	cellular component
cell periphery	Orthology	cellular component
cytoplasmic part	Orthology	cellular component
negative regulation of gene expression	Orthology	biological process
intracellular non-membrane-bounded organelle	Orthology	cellular component
macromolecular complex	Orthology	cellular component
sequence-specific DNA binding	Orthology	molecular function
enzyme binding	Orthology	molecular function
cellular response to organic substance	Orthology	biological process
positive regulation of transcription, DNA-templated	Orthology	biological process
nuclear part	Blast	cellular component
nuclear body	Blast	cellular component
intracellular organelle part	Blast	cellular component
ribosome	Blast	cellular component

GO (Orthology)

23 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
angiogenesis	Hs	biological process
nucleic acid binding	Hs	molecular function
DNA binding	Hs	molecular function
RNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
nucleolus	Hs	cellular component
cytoplasm	Hs	cellular component
cell cortex	Hs	cellular component
protein C-terminus binding	Hs	molecular function
membrane	Hs	cellular component
negative regulation of translation	Hs	biological process
intracellular ribonucleoprotein complex	Hs	cellular component
cytoplasmic ribonucleoprotein granule	Hs	cellular component
telomeric DNA binding	Hs	molecular function
identical protein binding	Hs	molecular function
DNA topoisomerase binding	Hs	molecular function
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
mRNA 5'-UTR binding	Hs	molecular function
extracellular exosome	Hs	cellular component
cellular response to epidermal growth factor stimulus	Hs	biological process
positive regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter	Hs	biological process

GO (Blast)

30 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleic acid binding	Hs	molecular function	107	1.63e-24
DNA binding	Hs	molecular function	107	1.63e-24
RNA binding	Hs	molecular function	107	1.63e-24
protein binding	Hs	molecular function	107	1.63e-24
nucleus	Hs	cellular component	107	1.63e-24
nucleoplasm	Hs	cellular component	107	1.63e-24
U6atac snRNP	Hs	cellular component	44.7	1.38e-04
nucleolus	Hs	cellular component	107	1.63e-24
cytoplasm	Hs	cellular component	107	1.63e-24
cell cortex	Hs	cellular component	107	1.63e-24
protein C-terminus binding	Hs	molecular function	107	1.63e-24
Cajal body	Hs	cellular component	44.7	1.38e-04
large ribosomal subunit	Hs	cellular component	46.2	6.98e-06
membrane	Hs	cellular component	107	1.63e-24
nuclear speck	Hs	cellular component	44.7	1.38e-04
U6 snRNA binding	Hs	molecular function	44.7	1.38e-04
dendrite	Hs	cellular component	46.2	6.98e-06
intracellular ribonucleoprotein complex	Hs	cellular component	107	1.63e-24
U4 snRNA binding	Hs	molecular function	44.7	1.38e-04
U6atac snRNA binding	Hs	molecular function	44.7	1.38e-04
cytoplasmic ribonucleoprotein granule	Hs	cellular component	107	1.63e-24
telomeric DNA binding	Hs	molecular function	107	1.63e-24
histone binding	Hs	molecular function	44.7	1.38e-04
identical protein binding	Hs	molecular function	107	1.63e-24
cell projection	Hs	cellular component	46.2	6.98e-06
DNA topoisomerase binding	Hs	molecular function	107	1.63e-24
mRNA 5'-UTR binding	Hs	molecular function	107	1.63e-24
extracellular exosome	Hs	cellular component	107	1.63e-24
U4/U6 snRNP	Hs	cellular component	44.7	1.38e-04
ubiquitin-specific protease binding	Hs	molecular function	44.7	1.38e-04

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
nucleic acid binding	SUPERFAMILY	molecular function	1.75E-21

Gene Card

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