- Gene 'Phmamm.CG.MTP2014.S2...'
Gene Card
Best human hits
HMCN1; SEMA5A; SEMA5B
Species
Unique Gene ID
Phmamm.g00017202
Gene Model ID
Phmamm.CG.MTP2014.S2882.g17202
Location
S2882:12704..15204
Transcript Models and Sequences
Genoscope Yasuo Villefranche
5 results
AHC0AAA48YD03
Plate: Plate_48_D03
AHC0AAA213YE11
Plate: Plate_213_E11
AHC0AAA254YC20
Plate: Plate_254_C20
AHC0AAA262YA19
Plate: Plate_262_A19
AHC0AAA263YK14
Plate: Plate_263_K14
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
5 results
| IPR Term | Analysis | Definition |
|---|---|---|
| TSP1_rpt_sf | Gene3D | Thrombospondin type-1 (TSP1) repeat superfamily |
| TSP1_rpt | ProSiteProfiles | Thrombospondin type-1 (TSP1) repeat |
| TSP1_rpt_sf | SUPERFAMILY | Thrombospondin type-1 (TSP1) repeat superfamily |
| TSP1_rpt | Pfam | Thrombospondin type-1 (TSP1) repeat |
| TSP1_rpt | SMART | Thrombospondin type-1 (TSP1) repeat |
GOSlim
17 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| calcium ion binding | Blast | molecular function |
| protein binding | Blast | molecular function |
| extracellular region | Blast | cellular component |
| extracellular space | Blast | cellular component |
| cytoplasm | Blast | cellular component |
| plasma membrane | Blast | cellular component |
| membrane | Blast | cellular component |
| integral component of membrane | Blast | cellular component |
| cell junction | Blast | cellular component |
| extracellular exosome | Blast | cellular component |
| extracellular region part | Blast | cellular component |
| cell periphery | Blast | cellular component |
| cytoplasmic part | Blast | cellular component |
| receptor binding | Blast | molecular function |
| plasma membrane region | Blast | cellular component |
| anion binding | Blast | molecular function |
| carbohydrate derivative binding | Blast | molecular function |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
20 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| calcium ion binding | Hs | molecular function | 66.6 | 4.64e-13 |
| protein binding | Hs | molecular function | 68.6 | 7.88e-14 |
| extracellular region | Hs | cellular component | 66.6 | 4.64e-13 |
| proteinaceous extracellular matrix | Hs | cellular component | 66.6 | 4.64e-13 |
| basement membrane | Hs | cellular component | 66.6 | 4.64e-13 |
| extracellular space | Hs | cellular component | 68.6 | 7.88e-14 |
| cytoplasm | Hs | cellular component | 66.6 | 4.64e-13 |
| plasma membrane | Hs | cellular component | 68.6 | 7.88e-14 |
| cell cortex | Hs | cellular component | 66.6 | 4.64e-13 |
| membrane | Hs | cellular component | 68.6 | 7.88e-14 |
| integral component of membrane | Hs | cellular component | 68.6 | 7.88e-14 |
| cell junction | Hs | cellular component | 66.6 | 4.64e-13 |
| semaphorin receptor binding | Hs | molecular function | 68.6 | 7.88e-14 |
| extracellular matrix | Hs | cellular component | 66.6 | 4.64e-13 |
| cleavage furrow | Hs | cellular component | 66.6 | 4.64e-13 |
| chondroitin sulfate proteoglycan binding | Hs | molecular function | 68.6 | 7.88e-14 |
| neuropilin binding | Hs | molecular function | 68.6 | 7.88e-14 |
| heparan sulfate proteoglycan binding | Hs | molecular function | 68.6 | 7.88e-14 |
| syndecan binding | Hs | molecular function | 68.6 | 7.88e-14 |
| extracellular exosome | Hs | cellular component | 68.6 | 7.88e-14 |
| GO Term | Analysis | Type | e-value |
|---|
