- Gene 'Phmamm.CG.MTP2014.S2...'
Gene Card
Best human hits
MRPS7; RPS5
Species
Unique Gene ID
Phmamm.g00006589
Gene Model ID
Phmamm.CG.MTP2014.S278.g06589
Location
S278:39995..41470
Transcript Models and Sequences
Genoscope Yasuo Villefranche
1 result
AHC0AAA193YM02
Plate: Plate_193_M02
n/a
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
8 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Ribosomal_S7_dom_sf | SUPERFAMILY | Ribosomal protein S7 domain superfamily |
| Ribosomal_S5/S7_euk/arc | CDD | Ribosomal protein S5/S7, eukaryotic/archaeal |
| Ribosomal_S5/S7 | PANTHER | Ribosomal protein S5/S7 |
| Ribosomal_S7_CS | ProSitePatterns | Ribosomal protein S7, conserved site |
| Ribosomal_S7_dom_sf | Gene3D | Ribosomal protein S7 domain superfamily |
| Ribosomal_S7_dom | Pfam | Ribosomal protein S7 domain |
| Ribosomal_S5/S7_euk/arc | TIGRFAM | Ribosomal protein S5/S7, eukaryotic/archaeal |
| Ribosomal_S5/S7 | PIRSF | Ribosomal protein S5/S7 |
GOSlim
17 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | Orthology | biological process |
| RNA binding | Orthology | molecular function |
| structural constituent of ribosome | Orthology | molecular function |
| protein binding | Orthology | molecular function |
| nucleoplasm | Orthology | cellular component |
| mitochondrion | Blast | cellular component |
| mitochondrial inner membrane | Blast | cellular component |
| cytosol | Orthology | cellular component |
| ribosome | Orthology | cellular component |
| focal adhesion | Orthology | cellular component |
| translational initiation | Orthology | biological process |
| SRP-dependent cotranslational protein targeting to membrane | Orthology | biological process |
| membrane | Orthology | cellular component |
| extracellular exosome | Orthology | cellular component |
| RNA processing | Orthology | biological process |
| intracellular organelle part | Orthology | cellular component |
| mitochondrial matrix | Blast | cellular component |
GO (Orthology)
21 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| ribosomal small subunit assembly | Hs | biological process |
| nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | Hs | biological process |
| RNA binding | Hs | molecular function |
| mRNA binding | Hs | molecular function |
| structural constituent of ribosome | Hs | molecular function |
| protein binding | Hs | molecular function |
| nucleoplasm | Hs | cellular component |
| cytosol | Hs | cellular component |
| ribosome | Hs | cellular component |
| focal adhesion | Hs | cellular component |
| rRNA processing | Hs | biological process |
| translation | Hs | biological process |
| translational initiation | Hs | biological process |
| regulation of translational fidelity | Hs | biological process |
| SRP-dependent cotranslational protein targeting to membrane | Hs | biological process |
| small ribosomal subunit | Hs | cellular component |
| membrane | Hs | cellular component |
| rRNA binding | Hs | molecular function |
| cytosolic small ribosomal subunit | Hs | cellular component |
| intracellular ribonucleoprotein complex | Hs | cellular component |
| extracellular exosome | Hs | cellular component |
GO (Blast)
17 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| RNA binding | Hs | molecular function | 362 | 3.20e-129 |
| mRNA binding | Hs | molecular function | 362 | 3.20e-129 |
| structural constituent of ribosome | Hs | molecular function | 362 | 3.20e-129 |
| protein binding | Hs | molecular function | 362 | 3.20e-129 |
| nucleoplasm | Hs | cellular component | 362 | 3.20e-129 |
| mitochondrion | Hs | cellular component | 36.6 | 0.006 |
| mitochondrial inner membrane | Hs | cellular component | 36.6 | 0.006 |
| mitochondrial small ribosomal subunit | Hs | cellular component | 36.6 | 0.006 |
| cytosol | Hs | cellular component | 362 | 3.20e-129 |
| ribosome | Hs | cellular component | 362 | 3.20e-129 |
| focal adhesion | Hs | cellular component | 362 | 3.20e-129 |
| small ribosomal subunit | Hs | cellular component | 362 | 3.20e-129 |
| membrane | Hs | cellular component | 362 | 3.20e-129 |
| rRNA binding | Hs | molecular function | 362 | 3.20e-129 |
| cytosolic small ribosomal subunit | Hs | cellular component | 362 | 3.20e-129 |
| intracellular ribonucleoprotein complex | Hs | cellular component | 362 | 3.20e-129 |
| extracellular exosome | Hs | cellular component | 362 | 3.20e-129 |
GO (InterProScan)
4 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| RNA binding | ProSitePatterns | molecular function | |
| structural constituent of ribosome | CDD | molecular function | 5.12568E-140 |
| translation | CDD | biological process | 5.12568E-140 |
| small ribosomal subunit | CDD | cellular component | 5.12568E-140 |
