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GENE CARD

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Gene Card

Best human hits

TP53; TP63; TP73

Species

P.mammillata

Unique Gene ID

Phmamm.g00017079

Gene Model ID

Phmamm.CG.MTP2014.S2765.g17079

Location

S2765:7672..8761

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S2765.g17079.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

2 results

AHC0AAA19YB15

Plate: Plate_19_B15

AHC0AAA191YH24

Plate: Plate_191_H24

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
p53_tetrameristn Pfam p53, tetramerisation domain
p53-like_TF_DNA-bd SUPERFAMILY p53-like transcription factor, DNA-binding
p53_DNA-bd CDD p53, DNA-binding domain
p53_tumour_suppressor PANTHER p53 tumour suppressor family
p53_tetramer_sf SUPERFAMILY p53-like tetramerisation domain superfamily
p53_tetramer_sf Gene3D p53-like tetramerisation domain superfamily
p53_DNA-bd Pfam p53, DNA-binding domain
p53_tumour_suppressor PRINTS p53 tumour suppressor family
p53/RUNT-type_TF_DNA-bd_sf Gene3D p53/RUNT-type transcription factor, DNA-binding domain superfamily

GOSlim

51 results

GO Term Annotation Origin Type
RNA polymerase II core promoter proximal region sequence-specific DNA binding Blast molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Blast molecular function
transcription factor activity, transcription factor binding Blast molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Blast molecular function
DNA binding Blast molecular function
chromatin binding Blast molecular function
double-stranded DNA binding Blast molecular function
transcription factor activity, sequence-specific DNA binding Blast molecular function
protein binding Blast molecular function
ATP binding Blast molecular function
intracellular Blast cellular component
nucleus Blast cellular component
nucleoplasm Blast cellular component
nucleolus Blast cellular component
cytoplasm Blast cellular component
mitochondrion Blast cellular component
mitochondrial matrix Blast cellular component
endoplasmic reticulum Blast cellular component
Golgi apparatus Blast cellular component
cytosol Blast cellular component
regulation of transcription, DNA-templated InterProScan biological process
apoptotic process InterProScan biological process
transcription factor binding Blast molecular function
zinc ion binding Blast molecular function
membrane Blast cellular component
integral component of membrane Blast cellular component
nuclear body Blast cellular component
enzyme binding Blast molecular function
protein kinase binding Blast molecular function
cell junction Blast cellular component
ubiquitin protein ligase binding Blast molecular function
macromolecular complex Blast cellular component
identical protein binding Blast molecular function
neuron projection Blast cellular component
intracellular membrane-bounded organelle Blast cellular component
sequence-specific DNA binding Blast molecular function
transcription regulatory region DNA binding Blast molecular function
metal ion binding Blast molecular function
protein heterodimerization activity Blast molecular function
protein N-terminus binding Blast molecular function
intracellular organelle part Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component
nuclear lumen Blast cellular component
transcription regulatory region sequence-specific DNA binding Blast molecular function
macromolecular complex binding Blast molecular function
RNA binding Blast molecular function
transition metal ion binding Blast molecular function
intracellular part Blast cellular component
nucleoplasm part Blast cellular component
receptor binding Blast molecular function
protein oligomerization InterProScan biological process

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

70 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
chromatin Hs cellular component 197 1.90e-57
nuclear chromatin Hs cellular component 186 2.26e-53
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 197 1.90e-57
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 197 1.90e-57
transcription factor activity, transcription factor binding Hs molecular function 186 2.26e-53
transcription factor activity, core RNA polymerase binding Hs molecular function 168 2.16e-48
core promoter sequence-specific DNA binding Hs molecular function 168 2.16e-48
transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding involved in preinitiation complex assembly Hs molecular function 168 2.16e-48
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 197 1.90e-57
transcription factor activity, TFIID-class binding Hs molecular function 168 2.16e-48
RNA polymerase II transcription factor binding Hs molecular function 168 2.16e-48
TFIID-class transcription factor binding Hs molecular function 168 2.16e-48
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 168 2.16e-48
protease binding Hs molecular function 168 2.16e-48
p53 binding Hs molecular function 197 1.90e-57
DNA binding Hs molecular function 197 1.90e-57
chromatin binding Hs molecular function 197 1.90e-57
damaged DNA binding Hs molecular function 197 1.90e-57
double-stranded DNA binding Hs molecular function 186 2.26e-53
transcription factor activity, sequence-specific DNA binding Hs molecular function 197 1.90e-57
mRNA 3'-UTR binding Hs molecular function 168 2.16e-48
copper ion binding Hs molecular function 168 2.16e-48
protein binding Hs molecular function 197 1.90e-57
ATP binding Hs molecular function 168 2.16e-48
intracellular Hs cellular component 168 2.16e-48
nucleus Hs cellular component 197 1.90e-57
nucleoplasm Hs cellular component 197 1.90e-57
replication fork Hs cellular component 168 2.16e-48
transcription factor complex Hs cellular component 197 1.90e-57
transcription factor TFIID complex Hs cellular component 168 2.16e-48
nucleolus Hs cellular component 168 2.16e-48
cytoplasm Hs cellular component 197 1.90e-57
mitochondrion Hs cellular component 197 1.90e-57
mitochondrial matrix Hs cellular component 168 2.16e-48
endoplasmic reticulum Hs cellular component 168 2.16e-48
rough endoplasmic reticulum Hs cellular component 186 2.26e-53
Golgi apparatus Hs cellular component 197 1.90e-57
cytosol Hs cellular component 197 1.90e-57
transcription factor binding Hs molecular function 197 1.90e-57
zinc ion binding Hs molecular function 168 2.16e-48
membrane Hs cellular component 168 2.16e-48
integral component of membrane Hs cellular component 168 2.16e-48
nuclear matrix Hs cellular component 168 2.16e-48
nuclear body Hs cellular component 168 2.16e-48
PML body Hs cellular component 168 2.16e-48
enzyme binding Hs molecular function 168 2.16e-48
protein kinase binding Hs molecular function 197 1.90e-57
protein phosphatase binding Hs molecular function 168 2.16e-48
protein domain specific binding Hs molecular function 186 2.26e-53
cell junction Hs cellular component 197 1.90e-57
dendrite Hs cellular component 186 2.26e-53
receptor tyrosine kinase binding Hs molecular function 168 2.16e-48
ubiquitin protein ligase binding Hs molecular function 168 2.16e-48
macromolecular complex Hs cellular component 168 2.16e-48
histone acetyltransferase binding Hs molecular function 168 2.16e-48
identical protein binding Hs molecular function 197 1.90e-57
histone deacetylase binding Hs molecular function 168 2.16e-48
neuron projection Hs cellular component 186 2.26e-53
intracellular membrane-bounded organelle Hs cellular component 197 1.90e-57
sequence-specific DNA binding Hs molecular function 197 1.90e-57
protein self-association Hs molecular function 168 2.16e-48
transcription regulatory region DNA binding Hs molecular function 197 1.90e-57
metal ion binding Hs molecular function 197 1.90e-57
protein heterodimerization activity Hs molecular function 168 2.16e-48
protein N-terminus binding Hs molecular function 168 2.16e-48
WW domain binding Hs molecular function 186 2.26e-53
chaperone binding Hs molecular function 168 2.16e-48
protein phosphatase 2A binding Hs molecular function 168 2.16e-48
MDM2/MDM4 family protein binding Hs molecular function 197 1.90e-57
disordered domain specific binding Hs molecular function 168 2.16e-48

GO (InterProScan)

7 results

GO Term Analysis Type e-value
DNA binding PANTHER molecular function 5.6E-81
transcription factor activity, sequence-specific DNA binding PANTHER molecular function 5.6E-81
nucleus PANTHER cellular component 5.6E-81
regulation of transcription, DNA-templated PANTHER biological process 5.6E-81
apoptotic process PANTHER biological process 5.6E-81
transcription regulatory region DNA binding CDD molecular function 1.37224E-68
protein tetramerization Gene3D biological process 3.5E-13

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