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GENE CARD

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Gene Card

Best human hits

CHST1; CHST2; CHST3

Species

P.mammillata

Unique Gene ID

Phmamm.g00006485

Gene Model ID

Phmamm.CG.MTP2014.S272.g06485

Location

S272:24315..26101

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S272.g06485.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

9 results

AHC0AAA14YE15

Plate: Plate_14_E15

AHC0AAA2YN09

Plate: Plate_2_N09

AHC0AAA47YD16

Plate: Plate_47_D16

AHC0AAA68YI15

Plate: Plate_68_I15

AHC0AAA102YF16

Plate: Plate_102_F16

AHC0AAA170YC06

Plate: Plate_170_C06

AHC0AAA173YI13

Plate: Plate_173_I13

AHC0AAA212YI01

Plate: Plate_212_I01

AHC0AAA262YF07

Plate: Plate_262_F07

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
Sulfotransferase_dom Pfam Sulfotransferase domain

GOSlim

16 results

GO Term Annotation Origin Type
Golgi membrane Orthology cellular component
Golgi apparatus Orthology cellular component
multicellular organism development Orthology biological process
membrane Orthology cellular component
integral component of membrane Orthology cellular component
transferase activity Orthology molecular function
immune response Orthology biological process
cell adhesion Orthology biological process
cell-cell signaling Orthology biological process
Golgi apparatus part Orthology cellular component
organic substance metabolic process Orthology biological process
cellular metabolic process Orthology biological process
defense response Orthology biological process
protein metabolic process Orthology biological process
intrinsic component of membrane Orthology cellular component
cellular protein modification process Orthology biological process

GO (Orthology)

22 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
Golgi membrane Hs cellular component
N-acetylglucosamine 6-O-sulfotransferase activity Hs molecular function
Golgi apparatus Hs cellular component
trans-Golgi network Hs cellular component
carbohydrate metabolic process Hs biological process
galactose metabolic process Hs biological process
N-acetylglucosamine metabolic process Hs biological process
sulfur compound metabolic process Hs biological process
inflammatory response Hs biological process
multicellular organism development Hs biological process
sulfotransferase activity Hs molecular function
chondroitin 6-sulfotransferase activity Hs molecular function
membrane Hs cellular component
integral component of membrane Hs cellular component
transferase activity Hs molecular function
chondroitin sulfate biosynthetic process Hs biological process
intrinsic component of Golgi membrane Hs cellular component
keratan sulfotransferase activity Hs molecular function
immune response Hs biological process
cell adhesion Hs biological process
cell-cell signaling Hs biological process
O-glycan processing Hs biological process

GO (Blast)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
Golgi membrane Hs cellular component 134 1.08e-34
N-acetylglucosamine 6-O-sulfotransferase activity Hs molecular function 134 1.08e-34
Golgi apparatus Hs cellular component 134 1.08e-34
trans-Golgi network Hs cellular component 117 2.45e-28
sulfotransferase activity Hs molecular function 134 1.08e-34
chondroitin 6-sulfotransferase activity Hs molecular function 134 1.08e-34
membrane Hs cellular component 134 1.08e-34
integral component of membrane Hs cellular component 134 1.08e-34
transferase activity Hs molecular function 134 1.08e-34
intrinsic component of Golgi membrane Hs cellular component 117 2.45e-28
keratan sulfotransferase activity Hs molecular function 119 1.53e-29

GO (InterProScan)

1 result

GO Term Analysis Type e-value
sulfotransferase activity Pfam molecular function 5.6E-16

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