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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S2...'

Gene Card

Best human hits

KLHL12; KLHL18; KLHL38

Species

P.mammillata

Unique Gene ID

Phmamm.g00016957

Gene Model ID

Phmamm.CG.MTP2014.S2684.g16957

Location

S2684:2878..6720

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S2684.g16957.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

4 results

AHC0AAA61YH01

Plate: Plate_61_H01

AHC0AAA70YJ23

Plate: Plate_70_J23

AHC0AAA185YM12

Plate: Plate_185_M12

AHC0AAA243YJ20

Plate: Plate_243_J20

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
SKP1/BTB/POZ_sf SUPERFAMILY SKP1/BTB/POZ domain superfamily
Kelch-typ_b-propeller Gene3D Kelch-type beta propeller
BTB/POZ_dom ProSiteProfiles BTB/POZ domain
BACK SMART BTB/Kelch-associated
Kelch_1 SMART Kelch repeat type 1
Gal_Oxase/kelch_b-propeller SUPERFAMILY Galactose oxidase/kelch, beta-propeller
BTB/POZ_dom Pfam BTB/POZ domain
BACK Pfam BTB/Kelch-associated
Kelch_1 Pfam Kelch repeat type 1

GOSlim

15 results

GO Term Annotation Origin Type
Golgi membrane Blast cellular component
ubiquitin-protein transferase activity Blast molecular function
protein binding Blast molecular function
microtubule organizing center Blast cellular component
cytosol Blast cellular component
cytoplasmic vesicle Blast cellular component
identical protein binding Blast molecular function
intracellular membrane-bounded organelle Blast cellular component
membrane part Blast cellular component
whole membrane Blast cellular component
bounding membrane of organelle Blast cellular component
macromolecular complex Blast cellular component
intracellular organelle part Blast cellular component
endomembrane system Blast cellular component
intracellular part Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Golgi membrane Hs cellular component 127 8.02e-32
ubiquitin-protein transferase activity Hs molecular function 127 8.02e-32
protein binding Hs molecular function 127 8.02e-32
microtubule organizing center Hs cellular component 127 8.02e-32
cytosol Hs cellular component 127 8.02e-32
COPII vesicle coat Hs cellular component 127 8.02e-32
COPII-coated ER to Golgi transport vesicle Hs cellular component 127 8.02e-32
cytoplasmic vesicle Hs cellular component 127 8.02e-32
Cul3-RING ubiquitin ligase complex Hs cellular component 127 8.02e-32
identical protein binding Hs molecular function 127 8.02e-32
intracellular membrane-bounded organelle Hs cellular component 127 8.02e-32

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding Gene3D molecular function 5.3E-19