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GENE CARD

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Gene Card

Best human hits

NLRC3; NLRP5; TCTE1

Species

P.mammillata

Unique Gene ID

Phmamm.g00016939

Gene Model ID

Phmamm.CG.MTP2014.S2669.g16939

Location

S2669:4797..8762

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S2669.g16939.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Leu-rich_rpt Pfam Leucine-rich repeat
ZU5_dom Pfam ZU5 domain
LRR_dom_sf Gene3D Leucine-rich repeat domain superfamily

GOSlim

15 results

GO Term Annotation Origin Type
nucleotide binding Blast molecular function
protein binding Blast molecular function
ATP binding Blast molecular function
nucleus Blast cellular component
nucleolus Blast cellular component
cytoplasm Blast cellular component
mitochondrion Blast cellular component
microtubule organizing center Blast cellular component
cytosol Blast cellular component
perinuclear region of cytoplasm Blast cellular component
cell projection part Blast cellular component
microtubule Blast cellular component
macromolecular complex Blast cellular component
cytoplasmic part Blast cellular component
plasma membrane region Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 43.5 1.41e-04
protein binding Hs molecular function 43.5 1.41e-04
ATP binding Hs molecular function 43.5 1.41e-04
nucleus Hs cellular component 42.0 4.21e-04
nucleolus Hs cellular component 42.0 4.21e-04
cytoplasm Hs cellular component 43.5 1.41e-04
mitochondrion Hs cellular component 42.0 4.21e-04
microtubule organizing center Hs cellular component 43.5 1.41e-04
cytosol Hs cellular component 43.5 1.41e-04
sperm flagellum Hs cellular component 40.8 0.001
phosphatidylinositol 3-kinase regulatory subunit binding Hs molecular function 43.5 1.41e-04
perinuclear region of cytoplasm Hs cellular component 43.5 1.41e-04

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding Pfam molecular function 1.0E-4