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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S2...'

Gene Card

Best human hits

SNX2; SNX30; SNX7

Species

P.mammillata

Unique Gene ID

Phmamm.g00006344

Gene Model ID

Phmamm.CG.MTP2014.S264.g06344

Location

S264:72685..75377

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S264.g06344.01.t
Phmamm.CG.MTP2014.S264.g06344.02.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

8 results

AHC0AAA18YL14

Plate: Plate_18_L14

AHC0AAA18YL15

Plate: Plate_18_L15

AHC0AAA147YG06

Plate: Plate_147_G06

AHC0AAA147YI08

Plate: Plate_147_I08

AHC0AAA166YE22

Plate: Plate_166_E22

AHC0AAA221YM09

Plate: Plate_221_M09

AHC0AAA246YG16

Plate: Plate_246_G16

AHC0AAA262YG24

Plate: Plate_262_G24

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
PX_dom_sf SUPERFAMILY PX domain superfamily
Phox ProSiteProfiles Phox homologous domain
PX_dom_sf Gene3D PX domain superfamily
AH/BAR_dom_sf Gene3D AH/BAR domain superfamily
Vps5_C Pfam Sorting nexin Vps5-like, C-terminal
Phox Pfam Phox homologous domain
AH/BAR_dom_sf SUPERFAMILY AH/BAR domain superfamily
Phox SMART Phox homologous domain

GOSlim

29 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
intracellular Blast cellular component
cytoplasm Orthology cellular component
lysosome Blast cellular component
endosome Orthology cellular component
cytosol Blast cellular component
protein transport Orthology biological process
membrane Orthology cellular component
lamellipodium Blast cellular component
cytoplasmic vesicle Orthology cellular component
macromolecular complex Blast cellular component
protein homodimerization activity Blast molecular function
cell projection Blast cellular component
protein heterodimerization activity Blast molecular function
extracellular exosome Blast cellular component
membrane organization Orthology biological process
organelle organization Orthology biological process
binding Orthology molecular function
membrane part Orthology cellular component
intracellular organelle part Orthology cellular component
organelle membrane Orthology cellular component
anion binding Orthology molecular function
receptor binding Blast molecular function
macromolecular complex binding Blast molecular function
whole membrane Blast cellular component
bounding membrane of organelle Blast cellular component
endomembrane system Blast cellular component
early endosome Blast cellular component
cell adhesion molecule binding Blast molecular function

GO (Orthology)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
protein binding Hs molecular function
cytoplasm Hs cellular component
endosome Hs cellular component
endocytosis Hs biological process
lipid binding Hs molecular function
protein transport Hs biological process
membrane Hs cellular component
vesicle organization Hs biological process
extrinsic component of membrane Hs cellular component
cytoplasmic vesicle membrane Hs cellular component
cytoplasmic vesicle Hs cellular component
phosphatidylinositol binding Hs molecular function

GO (Blast)

27 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
epidermal growth factor receptor binding Hs molecular function 125 1.66e-31
insulin receptor binding Hs molecular function 125 1.66e-31
protein binding Hs molecular function 316 2.49e-104
intracellular Hs cellular component 125 1.66e-31
cytoplasm Hs cellular component 316 2.49e-104
lysosome Hs cellular component 125 1.66e-31
endosome Hs cellular component 316 2.49e-104
cytosol Hs cellular component 125 1.66e-31
lipid binding Hs molecular function 306 2.55e-100
endosome membrane Hs cellular component 125 1.66e-31
membrane Hs cellular component 306 2.55e-100
extrinsic component of membrane Hs cellular component 316 2.49e-104
lamellipodium Hs cellular component 125 1.66e-31
cytoplasmic vesicle membrane Hs cellular component 306 2.55e-100
retromer complex Hs cellular component 125 1.66e-31
retromer, tubulation complex Hs cellular component 125 1.66e-31
cytoplasmic vesicle Hs cellular component 306 2.55e-100
early endosome membrane Hs cellular component 125 1.66e-31
macromolecular complex Hs cellular component 125 1.66e-31
phosphatidylinositol binding Hs molecular function 316 2.49e-104
protein homodimerization activity Hs molecular function 125 1.66e-31
cell projection Hs cellular component 125 1.66e-31
cadherin binding Hs molecular function 125 1.66e-31
protein heterodimerization activity Hs molecular function 125 1.66e-31
extracellular exosome Hs cellular component 125 1.66e-31
transferrin receptor binding Hs molecular function 125 1.66e-31
leptin receptor binding Hs molecular function 125 1.66e-31

GO (InterProScan)

1 result

GO Term Analysis Type e-value
phosphatidylinositol binding Gene3D molecular function 7.5E-35

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