Aniseed - Gene card

Gene Card

Best human hits

DRG1; GTPBP4

Species

P.mammillata

Unique Gene ID

Phmamm.g00006321

Gene Model ID

Phmamm.CG.MTP2014.S263.g06321

Location

S263:23596..31035

Transcript Models and Sequences

Phmamm.CG.MTP2014.S263.g06321.01.t
Phmamm.CG.MTP2014.S263.g06321.02.t
Phmamm.CG.MTP2014.S263.g06321.03.t
Phmamm.CG.MTP2014.S263.g06321.04.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

4 results

AHC0AAA228YA19

Plate: Plate_228_A19

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
GTP_binding_domain	PRINTS	GTP binding domain
P-loop_NTPase	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolase
NOG1	PANTHER	Nucleolar GTP-binding protein 1
GTP_binding_domain	Pfam	GTP binding domain
NOG_C	Pfam	NOG, C-terminal
NOG1_Rossman_fold_dom	Pfam	Nucleolar GTP-binding protein 1, Rossman-fold domain
G_OBG	ProSiteProfiles	OBG-type guanine nucleotide-binding (G) domain

GOSlim

30 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
RNA binding	Orthology	molecular function
GTPase activity	Orthology	molecular function
protein binding	Orthology	molecular function
GTP binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleolus	Orthology	cellular component
cytoplasm	Orthology	cellular component
Golgi apparatus	Orthology	cellular component
centrosome	Blast	cellular component
cytosol	Orthology	cellular component
transcription factor binding	Blast	molecular function
negative regulation of cell proliferation	Orthology	biological process
membrane	Orthology	cellular component
nuclear body	Blast	cellular component
nuclear membrane	Orthology	cellular component
identical protein binding	Blast	molecular function
perinuclear region of cytoplasm	Orthology	cellular component
cell cycle	Orthology	biological process
regulation of catalytic activity	Orthology	biological process
molecular transducer activity	Orthology	molecular function
protein serine/threonine kinase activity	Orthology	molecular function
regulation of cellular metabolic process	Orthology	biological process
RNA processing	Orthology	biological process
cell differentiation	Orthology	biological process
DNA replication	Orthology	biological process
cell adhesion	Orthology	biological process
cell migration	Orthology	biological process
protein ubiquitination	Orthology	biological process
macromolecular complex	Blast	cellular component

GO (Orthology)

23 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
regulation of cyclin-dependent protein serine/threonine kinase activity	Hs	biological process
nucleotide binding	Hs	molecular function
maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	Hs	biological process
osteoblast differentiation	Hs	biological process
RNA binding	Hs	molecular function
GTPase activity	Hs	molecular function
protein binding	Hs	molecular function
GTP binding	Hs	molecular function
nucleus	Hs	cellular component
nucleolus	Hs	cellular component
cytoplasm	Hs	cellular component
Golgi apparatus	Hs	cellular component
cytosol	Hs	cellular component
negative regulation of DNA replication	Hs	biological process
negative regulation of cell proliferation	Hs	biological process
membrane	Hs	cellular component
negative regulation of cell-cell adhesion	Hs	biological process
negative regulation of cell migration	Hs	biological process
negative regulation of protein ubiquitination	Hs	biological process
nuclear membrane	Hs	cellular component
ribosome biogenesis	Hs	biological process
perinuclear region of cytoplasm	Hs	cellular component
protein stabilization	Hs	biological process

GO (Blast)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	458	1.17e-155
RNA binding	Hs	molecular function	458	1.17e-155
GTPase activity	Hs	molecular function	458	1.17e-155
protein binding	Hs	molecular function	458	1.17e-155
GTP binding	Hs	molecular function	458	1.17e-155
nucleus	Hs	cellular component	458	1.17e-155
nucleolus	Hs	cellular component	458	1.17e-155
cytoplasm	Hs	cellular component	458	1.17e-155
Golgi apparatus	Hs	cellular component	458	1.17e-155
centrosome	Hs	cellular component	38.5	0.009
cytosol	Hs	cellular component	458	1.17e-155
polysome	Hs	cellular component	38.5	0.009
transcription factor binding	Hs	molecular function	38.5	0.009
membrane	Hs	cellular component	458	1.17e-155
nuclear body	Hs	cellular component	38.5	0.009
nuclear membrane	Hs	cellular component	458	1.17e-155
identical protein binding	Hs	molecular function	38.5	0.009
perinuclear region of cytoplasm	Hs	cellular component	458	1.17e-155

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
GTP binding	Pfam	molecular function	4.1E-24
nucleolus	PANTHER	cellular component	7.9E-153