Aniseed - Gene card

Gene Card

Best human hits

CTGF; CYR61; NOV

Species

P.mammillata

Unique Gene ID

Phmamm.g00006228

Gene Model ID

Phmamm.CG.MTP2014.S257.g06228

Location

S257:23877..26032

Transcript Models and Sequences

Phmamm.CG.MTP2014.S257.g06228.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term	Analysis	Definition
Cys_knot_C	ProSiteProfiles	Cystine knot, C-terminal
TSP1_rpt_sf	Gene3D	Thrombospondin type-1 (TSP1) repeat superfamily
TSP1_rpt	ProSiteProfiles	Thrombospondin type-1 (TSP1) repeat
Glyco_hormone_CN	Pfam	Glycoprotein hormone subunit beta
TSP1_rpt	Pfam	Thrombospondin type-1 (TSP1) repeat
VWF_dom	ProSiteProfiles	VWFC domain
Cys_knot_C	SMART	Cystine knot, C-terminal
Cys_knot_C	ProSitePatterns	Cystine knot, C-terminal
TSP1_rpt_sf	SUPERFAMILY	Thrombospondin type-1 (TSP1) repeat superfamily
TSP1_rpt	SMART	Thrombospondin type-1 (TSP1) repeat

GOSlim

79 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
angiogenesis	Orthology	biological process
integrin binding	Orthology	molecular function
protein binding	Orthology	molecular function
extracellular region	Orthology	cellular component
extracellular space	Orthology	cellular component
cytoplasm	Orthology	cellular component
endoplasmic reticulum lumen	Orthology	cellular component
cytosol	Orthology	cellular component
plasma membrane	Orthology	cellular component
transcription initiation from RNA polymerase II promoter	Orthology	biological process
chemotaxis	Orthology	biological process
cell adhesion	Orthology	biological process
cell-cell signaling	Orthology	biological process
protein C-terminus binding	Orthology	molecular function
cell proliferation	Orthology	biological process
positive regulation of cell proliferation	Orthology	biological process
response to wounding	Orthology	biological process
anatomical structure morphogenesis	Orthology	biological process
regulation of gene expression	Orthology	biological process
positive regulation of gene expression	Orthology	biological process
negative regulation of gene expression	Orthology	biological process
positive regulation of cell death	Orthology	biological process
cell migration	Orthology	biological process
cell junction	Orthology	cellular component
cell differentiation	Orthology	biological process
extracellular matrix organization	Orthology	biological process
axon	Orthology	cellular component
intracellular signal transduction	Orthology	biological process
neuronal cell body	Orthology	cellular component
positive regulation of apoptotic process	Orthology	biological process
negative regulation of apoptotic process	Orthology	biological process
intracellular membrane-bounded organelle	Orthology	cellular component
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
perinuclear region of cytoplasm	Orthology	cellular component
negative regulation of cell death	Orthology	biological process
endoplasmic reticulum	Orthology	cellular component
signal transduction	Orthology	biological process
extracellular exosome	Orthology	cellular component
animal organ development	Orthology	biological process
cellular component organization	Orthology	biological process
protein phosphorylation	Orthology	biological process
heart development	Orthology	biological process
receptor binding	Orthology	molecular function
Golgi apparatus part	Orthology	cellular component
cell periphery	Orthology	cellular component
cytoplasmic part	Orthology	cellular component
cell surface receptor signaling pathway	Orthology	biological process
developmental process	Orthology	biological process
molecular function regulator	Orthology	molecular function
regulation of signal transduction	Orthology	biological process
signaling receptor activity	Orthology	molecular function
anion binding	Orthology	molecular function
carbohydrate derivative binding	Orthology	molecular function
cellular response to organic substance	Orthology	biological process
anatomical structure development	Orthology	biological process
response to organic substance	Orthology	biological process
regulation of molecular function	Orthology	biological process
organic substance metabolic process	Orthology	biological process
regulation of transcription from RNA polymerase II promoter	Orthology	biological process
positive regulation of signal transduction	Orthology	biological process
extracellular region part	Orthology	cellular component
response to lipid	Orthology	biological process
endopeptidase activity	Orthology	molecular function
positive regulation of hydrolase activity	Orthology	biological process
cellular protein modification process	Orthology	biological process
wound healing	Orthology	biological process
Notch signaling pathway	Orthology	biological process
positive regulation of catalytic activity	Orthology	biological process
protein kinase activity	Orthology	molecular function
cellular response to stress	Orthology	biological process
protein transport	Orthology	biological process
defense response	Orthology	biological process
binding	Orthology	molecular function
organelle organization	Orthology	biological process
regulation of cellular metabolic process	Orthology	biological process
DNA metabolic process	Orthology	biological process
cellular metabolic process	Orthology	biological process
amide biosynthetic process	Orthology	biological process

GO (Orthology)

105 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
cartilage condensation	Hs	biological process
ossification	Hs	biological process
angiogenesis	Hs	biological process
regulation of cell growth	Hs	biological process
osteoblast differentiation	Hs	biological process
tissue homeostasis	Hs	biological process
positive regulation of protein phosphorylation	Hs	biological process
fibronectin binding	Hs	molecular function
chondrocyte differentiation	Hs	biological process
atrioventricular valve morphogenesis	Hs	biological process
Notch binding	Hs	molecular function
integrin binding	Hs	molecular function
protein binding	Hs	molecular function
insulin-like growth factor binding	Hs	molecular function
extracellular region	Hs	cellular component
proteinaceous extracellular matrix	Hs	cellular component
extracellular space	Hs	cellular component
cytoplasm	Hs	cellular component
endoplasmic reticulum lumen	Hs	cellular component
cis-Golgi network	Hs	cellular component
cytosol	Hs	cellular component
plasma membrane	Hs	cellular component
gap junction	Hs	cellular component
cell cortex	Hs	cellular component
transcription initiation from RNA polymerase II promoter	Hs	biological process
chemotaxis	Hs	biological process
cell adhesion	Hs	biological process
cell-matrix adhesion	Hs	biological process
integrin-mediated signaling pathway	Hs	biological process
cell-cell signaling	Hs	biological process
aging	Hs	biological process
protein C-terminus binding	Hs	molecular function
growth factor activity	Hs	molecular function
heparin binding	Hs	molecular function
cell proliferation	Hs	biological process
positive regulation of cell proliferation	Hs	biological process
fibroblast growth factor receptor signaling pathway	Hs	biological process
epidermis development	Hs	biological process
response to wounding	Hs	biological process
anatomical structure morphogenesis	Hs	biological process
response to glucose	Hs	biological process
regulation of gene expression	Hs	biological process
regulation of receptor activity	Hs	biological process
positive regulation of gene expression	Hs	biological process
negative regulation of gene expression	Hs	biological process
positive regulation of cell-substrate adhesion	Hs	biological process
positive regulation of cell death	Hs	biological process
response to organic cyclic compound	Hs	biological process
cell migration	Hs	biological process
regulation of lipid metabolic process	Hs	biological process
growth factor binding	Hs	molecular function
cell junction	Hs	cellular component
cell differentiation	Hs	biological process
extracellular matrix organization	Hs	biological process
negative regulation of cell growth	Hs	biological process
lung development	Hs	biological process
positive regulation of cell migration	Hs	biological process
axon	Hs	cellular component
dendrite	Hs	cellular component
positive regulation of BMP signaling pathway	Hs	biological process
extracellular matrix	Hs	cellular component
regulation of chondrocyte differentiation	Hs	biological process
response to estradiol	Hs	biological process
cell adhesion mediated by integrin	Hs	biological process
intracellular signal transduction	Hs	biological process
endothelial cell chemotaxis	Hs	biological process
chondrocyte proliferation	Hs	biological process
neuronal cell body	Hs	cellular component
positive regulation of apoptotic process	Hs	biological process
negative regulation of apoptotic process	Hs	biological process
response to amino acid	Hs	biological process
intracellular membrane-bounded organelle	Hs	cellular component
positive regulation of cysteine-type endopeptidase activity involved in apoptotic process	Hs	biological process
response to peptide hormone	Hs	biological process
post-translational protein modification	Hs	biological process
wound healing, spreading of cells	Hs	biological process
type B pancreatic cell proliferation	Hs	biological process
positive regulation of cell differentiation	Hs	biological process
positive regulation of osteoblast differentiation	Hs	biological process
positive regulation of Notch signaling pathway	Hs	biological process
positive regulation of protein kinase activity	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
positive regulation of JNK cascade	Hs	biological process
negative regulation of insulin secretion	Hs	biological process
perinuclear region of cytoplasm	Hs	cellular component
smooth muscle cell proliferation	Hs	biological process
negative regulation of inflammatory response	Hs	biological process
extracellular matrix binding	Hs	molecular function
positive regulation of stress fiber assembly	Hs	biological process
cell chemotaxis	Hs	biological process
negative regulation of cell death	Hs	biological process
positive regulation of cartilage development	Hs	biological process
hematopoietic stem cell homeostasis	Hs	biological process
regulation of ERK1 and ERK2 cascade	Hs	biological process
positive regulation of ERK1 and ERK2 cascade	Hs	biological process
DNA biosynthetic process	Hs	biological process
reactive oxygen species metabolic process	Hs	biological process
cell-cell adhesion	Hs	biological process
bone regeneration	Hs	biological process
positive regulation of ceramide biosynthetic process	Hs	biological process
endoplasmic reticulum	Hs	cellular component
signal transduction	Hs	biological process
Wnt signaling pathway	Hs	biological process
extracellular exosome	Hs	cellular component

GO (Blast)

28 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	169	2.00e-50
fibronectin binding	Hs	molecular function	203	3.24e-64
Notch binding	Hs	molecular function	167	4.42e-50
integrin binding	Hs	molecular function	203	3.24e-64
protein binding	Hs	molecular function	203	3.24e-64
insulin-like growth factor binding	Hs	molecular function	203	3.24e-64
extracellular region	Hs	cellular component	203	3.24e-64
proteinaceous extracellular matrix	Hs	cellular component	203	3.24e-64
extracellular space	Hs	cellular component	203	3.24e-64
cytoplasm	Hs	cellular component	167	4.42e-50
endoplasmic reticulum lumen	Hs	cellular component	169	2.00e-50
cis-Golgi network	Hs	cellular component	203	3.24e-64
cytosol	Hs	cellular component	203	3.24e-64
plasma membrane	Hs	cellular component	203	3.24e-64
gap junction	Hs	cellular component	167	4.42e-50
cell cortex	Hs	cellular component	203	3.24e-64
protein C-terminus binding	Hs	molecular function	203	3.24e-64
growth factor activity	Hs	molecular function	203	3.24e-64
heparin binding	Hs	molecular function	203	3.24e-64
growth factor binding	Hs	molecular function	169	2.00e-50
cell junction	Hs	cellular component	167	4.42e-50
axon	Hs	cellular component	167	4.42e-50
dendrite	Hs	cellular component	167	4.42e-50
extracellular matrix	Hs	cellular component	169	2.00e-50
neuronal cell body	Hs	cellular component	167	4.42e-50
intracellular membrane-bounded organelle	Hs	cellular component	167	4.42e-50
perinuclear region of cytoplasm	Hs	cellular component	203	3.24e-64
extracellular matrix binding	Hs	molecular function	169	2.00e-50

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
protein binding	ProSiteProfiles	molecular function	8.524