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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S2...'

Gene Card

Best human hits

ZMAT1; ZMAT3; ZMAT4

Species

P.mammillata

Unique Gene ID

Phmamm.g00016618

Gene Model ID

Phmamm.CG.MTP2014.S2393.g16618

Location

S2393:5499..12627

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S2393.g16618.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

12 results

AHC0AAA24YO17

Plate: Plate_24_O17

AHC0AAA26YI24

Plate: Plate_26_I24

AHC0AAA63YF05

Plate: Plate_63_F05

AHC0AAA112YJ05

Plate: Plate_112_J05

AHC0AAA139YJ15

Plate: Plate_139_J15

AHC0AAA144YK20

Plate: Plate_144_K20

AHC0AAA153YA11

Plate: Plate_153_A11

AHC0AAA88YN12

Plate: Plate_88_N12

AHC0AAA175YI23

Plate: Plate_175_I23

AHC0AAA239YG22

Plate: Plate_239_G22

AHC0AAA253YE24

Plate: Plate_253_E24

AHC0AAA264YJ05

Plate: Plate_264_J05

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
Znf_C2H2_sf SUPERFAMILY Zinc finger C2H2 superfamily
Matrin/U1-like-C_Znf_C2H2 SMART Matrin/U1-C-like, C2H2-type zinc finger

GOSlim

15 results

GO Term Annotation Origin Type
nucleic acid binding Orthology molecular function
DNA binding Orthology molecular function
RNA binding Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Blast cellular component
nucleolus Orthology cellular component
plasma membrane Blast cellular component
apoptotic process Orthology biological process
zinc ion binding Orthology molecular function
positive regulation of apoptotic process Orthology biological process
metal ion binding Orthology molecular function
cytoplasm Orthology cellular component
enzyme binding Orthology molecular function
intracellular signal transduction Orthology biological process

GO (Orthology)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
p53 binding Hs molecular function
nucleic acid binding Hs molecular function
DNA binding Hs molecular function
RNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleolus Hs cellular component
zinc ion binding Hs molecular function
positive regulation of apoptotic process Hs biological process
metal ion binding Hs molecular function
intrinsic apoptotic signaling pathway by p53 class mediator Hs biological process
double-stranded RNA binding Hs molecular function
cytoplasm Hs cellular component
enzyme binding Hs molecular function
miRNA binding Hs molecular function

GO (Blast)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
p53 binding Hs molecular function 64.3 4.04e-12
nucleic acid binding Hs molecular function 64.3 4.04e-12
DNA binding Hs molecular function 64.3 4.04e-12
RNA binding Hs molecular function 64.3 4.04e-12
protein binding Hs molecular function 64.3 4.04e-12
nucleus Hs cellular component 64.3 4.04e-12
nucleoplasm Hs cellular component 63.2 1.44e-11
nucleolus Hs cellular component 63.2 1.44e-11
plasma membrane Hs cellular component 63.2 1.44e-11
zinc ion binding Hs molecular function 64.3 4.04e-12
metal ion binding Hs molecular function 64.3 4.04e-12

GO (InterProScan)

2 results

GO Term Analysis Type e-value
nucleic acid binding SMART molecular function 0.0048
zinc ion binding SMART molecular function 0.0048