Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

ZNF148; ZNF30; ZNF777

Species

P.mammillata

Unique Gene ID

Phmamm.g00005811

Gene Model ID

Phmamm.CG.MTP2014.S232.g05811

Location

S232:131492..133011

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S232.g05811.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

2 results

AHC0AAA224YC12

Plate: Plate_224_C12

AHC0AAA258YB09

Plate: Plate_258_B09

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Znf_C2H2_sf SUPERFAMILY Zinc finger C2H2 superfamily
Znf_C2H2_type ProSitePatterns Zinc finger C2H2-type
Znf_C2H2_type ProSiteProfiles Zinc finger C2H2-type
Znf_C2H2_type SMART Zinc finger C2H2-type
Znf_C2H2_type Pfam Zinc finger C2H2-type

GOSlim

13 results

GO Term Annotation Origin Type
transcription regulatory region sequence-specific DNA binding Blast molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding Blast molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Blast molecular function
nucleic acid binding Blast molecular function
DNA binding Blast molecular function
double-stranded DNA binding Blast molecular function
transcription factor activity, sequence-specific DNA binding Blast molecular function
protein binding Blast molecular function
intracellular Blast cellular component
nucleus Blast cellular component
Golgi apparatus Blast cellular component
sequence-specific DNA binding Blast molecular function
metal ion binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
transcription regulatory region sequence-specific DNA binding Hs molecular function 65.5 1.87e-11
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 65.5 1.87e-11
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 65.5 1.87e-11
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 65.5 1.87e-11
nucleic acid binding Hs molecular function 65.5 1.87e-11
DNA binding Hs molecular function 65.5 1.87e-11
double-stranded DNA binding Hs molecular function 65.5 1.87e-11
transcription factor activity, sequence-specific DNA binding Hs molecular function 65.5 1.87e-11
protein binding Hs molecular function 65.5 1.87e-11
intracellular Hs cellular component 62.8 1.02e-10
nucleus Hs cellular component 65.5 1.87e-11
Golgi apparatus Hs cellular component 65.5 1.87e-11
sequence-specific DNA binding Hs molecular function 65.5 1.87e-11
metal ion binding Hs molecular function 65.5 1.87e-11

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding Pfam molecular function 4.9E-6