Login
Help

GENE CARD

Submit your Data

  1. Gene 'Phmamm.CG.MTP2014.S2...'

Gene Card

Best human hits

TFCP2; TFCP2L1; UBP1

Species

P.mammillata

Unique Gene ID

Phmamm.g00000955

Gene Model ID

Phmamm.CG.MTP2014.S23.g00955

Location

S23:241724..245044

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S23.g00955.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

11 results

AHC0AAA3YF14

Plate: Plate_3_F14

AHC0AAA34YK07

Plate: Plate_34_K07

AHC0AAA39YG22

Plate: Plate_39_G22

AHC0AAA114YB19

Plate: Plate_114_B19

AHC0AAA118YA03

Plate: Plate_118_A03

AHC0AAA143YD19

Plate: Plate_143_D19

AHC0AAA143YF20

Plate: Plate_143_F20

AHC0AAA148YG07

Plate: Plate_148_G07

AHC0AAA192YD01

Plate: Plate_192_D01

AHC0AAA249YP03

Plate: Plate_249_P03

AHC0AAA39YI24

Plate: Plate_39_I24

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
CP2 Pfam CP2 transcription factor
SAM/pointed_sf SUPERFAMILY Sterile alpha motif/pointed domain superfamily

GOSlim

30 results

GO Term Annotation Origin Type
negative regulation of transcription from RNA polymerase II promoter Orthology biological process
cell morphogenesis Orthology biological process
RNA polymerase II regulatory region sequence-specific DNA binding Orthology molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Orthology molecular function
core promoter proximal region sequence-specific DNA binding Orthology molecular function
angiogenesis Orthology biological process
DNA binding Orthology molecular function
transcription factor activity, sequence-specific DNA binding Orthology molecular function
transcription corepressor activity Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
mitochondrion Orthology cellular component
cytosol Orthology cellular component
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
regulation of transcription from RNA polymerase II promoter Orthology biological process
transcription from RNA polymerase II promoter Orthology biological process
transcription factor binding Orthology molecular function
membrane Orthology cellular component
macromolecular complex Orthology cellular component
sequence-specific DNA binding Orthology molecular function
negative regulation of transcription, DNA-templated Orthology biological process
positive regulation of transcription from RNA polymerase II promoter Orthology biological process
nucleolus Orthology cellular component
cell development Orthology biological process
animal organ development Orthology biological process
multicellular organism development Orthology biological process
mRNA metabolic process Orthology biological process

GO (Orthology)

34 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
cell morphogenesis Hs biological process
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function
core promoter proximal region sequence-specific DNA binding Hs molecular function
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function
angiogenesis Hs biological process
fibrillar center Hs cellular component
epithelial cell maturation Hs biological process
DNA binding Hs molecular function
transcription factor activity, sequence-specific DNA binding Hs molecular function
transcription corepressor activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
mitochondrion Hs cellular component
cytosol Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
regulation of transcription from RNA polymerase II promoter Hs biological process
transcription from RNA polymerase II promoter Hs biological process
steroid biosynthetic process Hs biological process
salivary gland development Hs biological process
transcription factor binding Hs molecular function
determination of adult lifespan Hs biological process
membrane Hs cellular component
viral genome replication Hs biological process
macromolecular complex Hs cellular component
mRNA transcription from RNA polymerase II promoter Hs biological process
sequence-specific DNA binding Hs molecular function
negative regulation of transcription, DNA-templated Hs biological process
positive regulation of growth Hs biological process
positive regulation of transcription from RNA polymerase II promoter Hs biological process

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 337 5.50e-108
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 491 3.46e-167
core promoter proximal region sequence-specific DNA binding Hs molecular function 375 2.31e-122
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 375 2.31e-122
fibrillar center Hs cellular component 337 5.50e-108
DNA binding Hs molecular function 491 3.46e-167
transcription factor activity, sequence-specific DNA binding Hs molecular function 491 3.46e-167
transcription corepressor activity Hs molecular function 491 3.46e-167
protein binding Hs molecular function 375 2.31e-122
nucleus Hs cellular component 491 3.46e-167
nucleoplasm Hs cellular component 491 3.46e-167
cytoplasm Hs cellular component 337 5.50e-108
mitochondrion Hs cellular component 337 5.50e-108
cytosol Hs cellular component 491 3.46e-167
transcription factor binding Hs molecular function 375 2.31e-122
membrane Hs cellular component 337 5.50e-108
macromolecular complex Hs cellular component 375 2.31e-122
sequence-specific DNA binding Hs molecular function 491 3.46e-167

GO (InterProScan)

1 result

GO Term Analysis Type e-value
transcription factor activity, sequence-specific DNA binding PANTHER molecular function 1.3E-170