Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

JMJD7; KDM8; TYW5

Species

P.mammillata

Unique Gene ID

Phmamm.g00005712

Gene Model ID

Phmamm.CG.MTP2014.S227.g05712

Location

S227:23610..31359

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S227.g05712.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
EF_Hand_1_Ca_BS ProSitePatterns EF-Hand 1, calcium-binding site
JmjC_dom ProSiteProfiles JmjC domain

GOSlim

17 results

GO Term Annotation Origin Type
chromatin binding Blast molecular function
iron ion binding Blast molecular function
protein binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
cytosol Blast cellular component
peptidase activity Blast molecular function
hydrolase activity Blast molecular function
protein homodimerization activity Blast molecular function
metal ion binding Blast molecular function
oxidation-reduction process Blast biological process
RNA binding Blast molecular function
intracellular non-membrane-bounded organelle Blast cellular component
catalytic activity Blast molecular function
organelle organization Blast biological process
cellular protein modification process Blast biological process

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
tRNA binding Hs molecular function 73.6 2.90e-14
chromatin binding Hs molecular function 66.6 1.15e-11
iron ion binding Hs molecular function 73.6 2.90e-14
protein binding Hs molecular function 65.5 1.43e-11
nucleus Hs cellular component 66.6 1.15e-11
nucleoplasm Hs cellular component 66.6 1.15e-11
chromosome Hs cellular component 66.6 1.15e-11
cytoplasm Hs cellular component 73.6 2.90e-14
cytosol Hs cellular component 66.6 1.15e-11
peptidase activity Hs molecular function 66.6 1.15e-11
oxidoreductase activity Hs molecular function 73.6 2.90e-14
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors Hs molecular function 73.6 2.90e-14
hydrolase activity Hs molecular function 66.6 1.15e-11
histone demethylase activity Hs molecular function 66.6 1.15e-11
protein homodimerization activity Hs molecular function 73.6 2.90e-14
metal ion binding Hs molecular function 73.6 2.90e-14
dioxygenase activity Hs molecular function 73.6 2.90e-14
histone demethylase activity (H3-K36 specific) Hs molecular function 66.6 1.15e-11
tRNAPhe (7-(3-amino-3-carboxypropyl)wyosine37-C2)-hydroxylase activity Hs molecular function 73.6 2.90e-14

GO (InterProScan)

No result

GO Term Analysis Type e-value