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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S2...'

Gene Card

Best human hits

BDP1

Species

P.mammillata

Unique Gene ID

Phmamm.g00005630

Gene Model ID

Phmamm.CG.MTP2014.S221.g05630

Location

S221:165688..167461

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S221.g05630.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

12 results

AHC0AAA16YI05

Plate: Plate_16_I05

AHC0AAA26YA10

Plate: Plate_26_A10

AHC0AAA43YJ09

Plate: Plate_43_J09

AHC0AAA55YH17

Plate: Plate_55_H17

AHC0AAA104YO18

Plate: Plate_104_O18

AHC0AAA108YN22

Plate: Plate_108_N22

AHC0AAA118YM08

Plate: Plate_118_M08

AHC0AAA99YE02

Plate: Plate_99_E02

AHC0AAA171YK12

Plate: Plate_171_K12

AHC0AAA189YL09

Plate: Plate_189_L09

AHC0AAA267YG07

Plate: Plate_267_G07

AHC0AAA55YJ19

Plate: Plate_55_J19

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
SANT/Myb SMART SANT/Myb domain
TFIIIB_B'' PANTHER Transcription factor TFIIIB component B''
Homeobox-like_sf SUPERFAMILY Homeobox-like domain superfamily
SANT/Myb CDD SANT/Myb domain

GOSlim

7 results

GO Term Annotation Origin Type
DNA binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
transcription, DNA-templated InterProScan biological process
nuclear part Blast cellular component
macromolecular complex Blast cellular component
transcription factor binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

6 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
transcription factor TFIIIB complex Hs cellular component 97.8 5.39e-21
TFIIIB-type transcription factor activity Hs molecular function 97.8 5.39e-21
TFIIIC-class transcription factor binding Hs molecular function 97.8 5.58e-21
DNA binding Hs molecular function 97.8 5.39e-21
nucleus Hs cellular component 97.8 5.58e-21
nucleoplasm Hs cellular component 97.8 5.58e-21

GO (InterProScan)

4 results

GO Term Analysis Type e-value
transcription factor TFIIIB complex PANTHER cellular component 2.5E-41
TFIIIB-type transcription factor activity PANTHER molecular function 2.5E-41
DNA binding SUPERFAMILY molecular function 2.69E-5
transcription from RNA polymerase III promoter PANTHER biological process 2.5E-41