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GENE CARD

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Gene Card

Best human hits

G3BP1; G3BP2; HNRNPD

Species

P.mammillata

Unique Gene ID

Phmamm.g00005613

Gene Model ID

Phmamm.CG.MTP2014.S220.g05613

Location

S220:121741..128579

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

34 results

AHC0AAA17YE24

Plate: Plate_17_E24

AHC0AAA18YL10

Plate: Plate_18_L10

AHC0AAA26YA02

Plate: Plate_26_A02

AHC0AAA26YN12

Plate: Plate_26_N12

AHC0AAA3YF15

Plate: Plate_3_F15

AHC0AAA6YN13

Plate: Plate_6_N13

AHC0AAA9YD04

Plate: Plate_9_D04

AHC0AAA44YG24

Plate: Plate_44_G24

AHC0AAA59YO21

Plate: Plate_59_O21

AHC0AAA69YA06

Plate: Plate_69_A06

AHC0AAA72YA21

Plate: Plate_72_A21

AHC0AAA72YB10

Plate: Plate_72_B10

AHC0AAA108YB23

Plate: Plate_108_B23

AHC0AAA111YH24

Plate: Plate_111_H24

AHC0AAA112YN15

Plate: Plate_112_N15

AHC0AAA126YE20

Plate: Plate_126_E20

AHC0AAA142YK12

Plate: Plate_142_K12

AHC0AAA143YM15

Plate: Plate_143_M15

AHC0AAA147YK14

Plate: Plate_147_K14

AHC0AAA81YI19

Plate: Plate_81_I19

AHC0AAA83YG22

Plate: Plate_83_G22

AHC0AAA147YM16

Plate: Plate_147_M16

AHC0AAA169YH03

Plate: Plate_169_H03

AHC0AAA174YG23

Plate: Plate_174_G23

AHC0AAA180YA03

Plate: Plate_180_A03

AHC0AAA198YC06

Plate: Plate_198_C06

AHC0AAA219YE03

Plate: Plate_219_E03

AHC0AAA220YJ12

Plate: Plate_220_J12

AHC0AAA235YK15

Plate: Plate_235_K15

AHC0AAA237YA06

Plate: Plate_237_A06

AHC0AAA239YL06

Plate: Plate_239_L06

AHC0AAA242YD09

Plate: Plate_242_D09

AHC0AAA250YB24

Plate: Plate_250_B24

AHC0AAA252YO16

Plate: Plate_252_O16

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term Analysis Definition
RRM_dom Pfam RNA recognition motif domain
Nucleotide-bd_a/b_plait_sf Gene3D Nucleotide-binding alpha-beta plait domain superfamily
RBD_domain_sf SUPERFAMILY RNA-binding domain superfamily
RRM_dom ProSiteProfiles RNA recognition motif domain
Nuclear_transport_factor_2_euk ProSiteProfiles Nuclear transport factor 2, eukaryote
NTF2-like_dom_sf SUPERFAMILY NTF2-like domain superfamily
RRM_dom SMART RNA recognition motif domain
G3BP2 PANTHER Ras GTPase-activating protein-binding protein 2
NTF2 Pfam Nuclear transport factor 2
Nuclear_transport_factor_2_euk CDD Nuclear transport factor 2, eukaryote

GOSlim

29 results

GO Term Annotation Origin Type
nucleotide binding Orthology molecular function
nucleic acid binding Orthology molecular function
DNA binding Orthology molecular function
chromatin binding Blast molecular function
RNA binding Orthology molecular function
protein binding Orthology molecular function
ATP binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Blast cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
plasma membrane Orthology cellular component
focal adhesion Orthology cellular component
transcription factor binding Blast molecular function
membrane Orthology cellular component
hydrolase activity Orthology molecular function
extracellular exosome Blast cellular component
negative regulation of canonical Wnt signaling pathway Orthology biological process
organelle organization Orthology biological process
nucleoside-triphosphatase activity Orthology molecular function
small GTPase mediated signal transduction Orthology biological process
cytoplasmic part Orthology cellular component
intracellular non-membrane-bounded organelle Orthology cellular component
macromolecular complex Orthology cellular component
positive regulation of signal transduction Orthology biological process
organic substance transport Orthology biological process
sequence-specific double-stranded DNA binding Blast molecular function
sequence-specific DNA binding Blast molecular function
enzyme binding Blast molecular function

GO (Orthology)

28 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleotide binding Hs molecular function
nucleic acid binding Hs molecular function
DNA binding Hs molecular function
RNA binding Hs molecular function
mRNA binding Hs molecular function
ATP-dependent DNA helicase activity Hs molecular function
ATP-dependent RNA helicase activity Hs molecular function
helicase activity Hs molecular function
nuclease activity Hs molecular function
endonuclease activity Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
focal adhesion Hs cellular component
Ras protein signal transduction Hs biological process
cytoplasmic stress granule Hs cellular component
membrane Hs cellular component
hydrolase activity Hs molecular function
receptor signaling complex scaffold activity Hs molecular function
intracellular ribonucleoprotein complex Hs cellular component
DNA duplex unwinding Hs biological process
stress granule assembly Hs biological process
mRNA transport Hs biological process
negative regulation of canonical Wnt signaling pathway Hs biological process
nucleic acid phosphodiester bond hydrolysis Hs biological process

GO (Blast)

30 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 286 2.20e-91
nucleic acid binding Hs molecular function 286 2.20e-91
DNA binding Hs molecular function 286 2.20e-91
AT DNA binding Hs molecular function 57.0 8.70e-09
chromatin binding Hs molecular function 57.0 8.70e-09
RNA binding Hs molecular function 286 2.20e-91
mRNA binding Hs molecular function 286 2.20e-91
ATP-dependent DNA helicase activity Hs molecular function 286 2.20e-91
ATP-dependent RNA helicase activity Hs molecular function 286 2.20e-91
helicase activity Hs molecular function 286 2.20e-91
nuclease activity Hs molecular function 286 2.20e-91
endonuclease activity Hs molecular function 286 2.20e-91
protein binding Hs molecular function 286 2.20e-91
ATP binding Hs molecular function 286 2.20e-91
nucleus Hs cellular component 286 2.20e-91
nucleoplasm Hs cellular component 57.0 8.70e-09
cytoplasm Hs cellular component 286 2.20e-91
cytosol Hs cellular component 286 2.20e-91
plasma membrane Hs cellular component 286 2.20e-91
focal adhesion Hs cellular component 286 2.20e-91
transcription factor binding Hs molecular function 57.0 8.70e-09
cytoplasmic stress granule Hs cellular component 286 2.20e-91
membrane Hs cellular component 286 2.20e-91
hydrolase activity Hs molecular function 286 2.20e-91
receptor signaling complex scaffold activity Hs molecular function 285 1.09e-90
intracellular ribonucleoprotein complex Hs cellular component 286 2.20e-91
mRNA 3'-UTR AU-rich region binding Hs molecular function 57.0 8.70e-09
telomeric DNA binding Hs molecular function 57.0 8.70e-09
histone deacetylase binding Hs molecular function 57.0 8.70e-09
extracellular exosome Hs cellular component 57.0 8.70e-09

GO (InterProScan)

2 results

GO Term Analysis Type e-value
nucleic acid binding SUPERFAMILY molecular function 6.31E-22
stress granule assembly PANTHER biological process 1.3E-114