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GENE CARD

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Gene Card

Best human hits

TNN

Species

P.mammillata

Unique Gene ID

Phmamm.g00000896

Gene Model ID

Phmamm.CG.MTP2014.S22.g00896

Location

S22:11663..15473

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S22.g00896.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
EGF-like_dom ProSiteProfiles EGF-like domain
EGF-like_CS ProSitePatterns EGF-like, conserved site
EGF_extracell Pfam EGF-like domain, extracellular

GOSlim

10 results

GO Term Annotation Origin Type
integrin binding Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
cell surface Blast cellular component
identical protein binding Blast molecular function
neuron projection Blast cellular component
neuronal cell body Blast cellular component
cell projection part Blast cellular component
axon Blast cellular component
synapse part Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
integrin binding Hs molecular function 38.1 0.009
protein binding Hs molecular function 38.1 0.009
extracellular region Hs cellular component 38.1 0.009
proteinaceous extracellular matrix Hs cellular component 38.1 0.009
cell surface Hs cellular component 38.1 0.009
identical protein binding Hs molecular function 38.1 0.009
neuron projection Hs cellular component 38.1 0.009
neuronal cell body Hs cellular component 38.1 0.009
CA3 pyramidal cell dendrite Hs cellular component 38.1 0.009
hippocampal mossy fiber expansion Hs cellular component 38.1 0.009

GO (InterProScan)

No result

GO Term Analysis Type e-value