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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S2...'

Gene Card

Best human hits

COL5A1; ITLN1; ITLN2

Species

P.mammillata

Unique Gene ID

Phmamm.g00016109

Gene Model ID

Phmamm.CG.MTP2014.S2051.g16109

Location

S2051:1275..8918

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S2051.g16109.01.t

External Database Gene Card

External database links

No result

Collections
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Genomicus Synteny Browser

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Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Fibrinogen_a/b/g_C_1 Gene3D Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1
Fibrinogen_a/b/g_C_dom Pfam Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
Fibrinogen_a/b/g_C_dom ProSiteProfiles Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
Fibrinogen-like_C SUPERFAMILY Fibrinogen-like, C-terminal

GOSlim

20 results

GO Term Annotation Origin Type
integrin binding Blast molecular function
calcium ion binding Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
extracellular space Blast cellular component
endoplasmic reticulum lumen Blast cellular component
plasma membrane Blast cellular component
membrane Blast cellular component
brush border membrane Blast cellular component
identical protein binding Blast molecular function
membrane raft Blast cellular component
metal ion binding Blast molecular function
extracellular exosome Blast cellular component
extracellular region part Blast cellular component
structural molecule activity Blast molecular function
macromolecular complex Blast cellular component
anion binding Blast molecular function
carbohydrate derivative binding Blast molecular function
binding Blast molecular function
intrinsic component of membrane Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

26 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
integrin binding Hs molecular function 46.6 2.32e-05
extracellular matrix structural constituent Hs molecular function 46.6 2.32e-05
calcium ion binding Hs molecular function 48.1 4.39e-06
protein binding Hs molecular function 46.6 2.32e-05
extracellular region Hs cellular component 48.5 3.03e-06
proteinaceous extracellular matrix Hs cellular component 46.6 2.32e-05
collagen trimer Hs cellular component 46.6 2.32e-05
collagen type V trimer Hs cellular component 46.6 2.32e-05
basement membrane Hs cellular component 46.6 2.32e-05
extracellular space Hs cellular component 46.6 2.32e-05
endoplasmic reticulum lumen Hs cellular component 46.6 2.32e-05
plasma membrane Hs cellular component 48.1 4.39e-06
heparin binding Hs molecular function 46.6 2.32e-05
membrane Hs cellular component 48.1 4.39e-06
carbohydrate binding Hs molecular function 48.5 3.03e-06
extracellular matrix Hs cellular component 46.6 2.32e-05
anchored component of membrane Hs cellular component 48.1 4.39e-06
brush border membrane Hs cellular component 48.1 4.39e-06
identical protein binding Hs molecular function 48.1 4.39e-06
receptor complex Hs cellular component 48.1 4.39e-06
proteoglycan binding Hs molecular function 46.6 2.32e-05
membrane raft Hs cellular component 48.1 4.39e-06
metal ion binding Hs molecular function 48.5 3.03e-06
platelet-derived growth factor binding Hs molecular function 46.6 2.32e-05
extracellular exosome Hs cellular component 48.1 4.39e-06
oligosaccharide binding Hs molecular function 48.1 4.39e-06

GO (InterProScan)

No result

GO Term Analysis Type e-value