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Gene Card

Best human hits

AP1G1; AP1G2; AP2A1

Species

P.mammillata

Unique Gene ID

Phmamm.g00005338

Gene Model ID

Phmamm.CG.MTP2014.S205.g05338

Location

S205:67035..80643

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S205.g05338.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

20 results

AHC0AAA25YB22

Plate: Plate_25_B22

AHC0AAA9YO18

Plate: Plate_9_O18

AHC0AAA29YM01

Plate: Plate_29_M01

AHC0AAA52YH10

Plate: Plate_52_H10

AHC0AAA65YA20

Plate: Plate_65_A20

AHC0AAA70YI07

Plate: Plate_70_I07

AHC0AAA75YC22

Plate: Plate_75_C22

AHC0AAA79YH10

Plate: Plate_79_H10

AHC0AAA80YF22

Plate: Plate_80_F22

AHC0AAA146YE14

Plate: Plate_146_E14

AHC0AAA148YK15

Plate: Plate_148_K15

AHC0AAA150YD22

Plate: Plate_150_D22

AHC0AAA93YG19

Plate: Plate_93_G19

AHC0AAA182YC15

Plate: Plate_182_C15

AHC0AAA185YP17

Plate: Plate_185_P17

AHC0AAA219YM14

Plate: Plate_219_M14

AHC0AAA223YN15

Plate: Plate_223_N15

AHC0AAA228YM15

Plate: Plate_228_M15

AHC0AAA228YP06

Plate: Plate_228_P06

AHC0AAA236YC15

Plate: Plate_236_C15

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
ARM-type_fold SUPERFAMILY Armadillo-type fold
AP1_complex_gsu PIRSF Adaptor protein complex AP-1, gamma subunit
Clathrin/coatomer_adapt-like_N Pfam Clathrin/coatomer adaptor, adaptin-like, N-terminal
Clathrin_app_Ig-like_sf SUPERFAMILY Clathrin adaptor, appendage, Ig-like subdomain superfamily
Clathrin_a/b/g-adaptin_app_Ig Pfam Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain
Clathrin_a/b/g-adaptin_app_Ig SMART Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain
ARM-like Gene3D Armadillo-like helical
GAE_dom ProSiteProfiles Gamma-adaptin ear (GAE) domain

GOSlim

38 results

GO Term Annotation Origin Type
Golgi membrane Orthology cellular component
binding Orthology molecular function
protein binding Orthology molecular function
cytoplasm Orthology cellular component
lysosomal membrane Orthology cellular component
endosome Orthology cellular component
Golgi apparatus Orthology cellular component
cytosol Orthology cellular component
plasma membrane Blast cellular component
intracellular protein transport Orthology biological process
protein C-terminus binding Blast molecular function
protein transport Orthology biological process
membrane Orthology cellular component
basolateral plasma membrane Blast cellular component
apical plasma membrane Blast cellular component
protein kinase binding Blast molecular function
cytoplasmic vesicle Orthology cellular component
intracellular membrane-bounded organelle Orthology cellular component
membrane organization Blast biological process
intracellular organelle part Orthology cellular component
whole membrane Orthology cellular component
bounding membrane of organelle Orthology cellular component
enzyme binding Orthology molecular function
immune system process Orthology biological process
cytoskeletal protein binding Orthology molecular function
cytoplasmic part Orthology cellular component
membrane part Orthology cellular component
macromolecular complex Orthology cellular component
Golgi apparatus part Orthology cellular component
endomembrane system Orthology cellular component
organelle membrane Orthology cellular component
organelle organization Orthology biological process
innate immune response Orthology biological process
plasma membrane part Blast cellular component
cell projection part Blast cellular component
plasma membrane region Blast cellular component
cytoskeletal part Blast cellular component
receptor binding Blast molecular function

GO (Orthology)

35 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
Golgi membrane Hs cellular component
transporter activity Hs molecular function
binding Hs molecular function
protein binding Hs molecular function
cytoplasm Hs cellular component
lysosomal membrane Hs cellular component
endosome Hs cellular component
Golgi apparatus Hs cellular component
Golgi-associated vesicle Hs cellular component
cytosol Hs cellular component
intracellular protein transport Hs biological process
endosome membrane Hs cellular component
protein transport Hs biological process
membrane Hs cellular component
viral process Hs biological process
vesicle-mediated transport Hs biological process
Rab GTPase binding Hs molecular function
antigen processing and presentation of exogenous peptide antigen via MHC class II Hs biological process
kinesin binding Hs molecular function
membrane coat Hs cellular component
AP-type membrane coat adaptor complex Hs cellular component
AP-1 adaptor complex Hs cellular component
clathrin adaptor complex Hs cellular component
transport vesicle Hs cellular component
clathrin-coated vesicle Hs cellular component
cytoplasmic vesicle membrane Hs cellular component
clathrin-coated vesicle membrane Hs cellular component
GTP-dependent protein binding Hs molecular function
cytoplasmic vesicle Hs cellular component
melanosome organization Hs biological process
trans-Golgi network membrane Hs cellular component
intracellular membrane-bounded organelle Hs cellular component
positive regulation of natural killer cell mediated cytotoxicity Hs biological process
recycling endosome Hs cellular component
Golgi to lysosome transport Hs biological process

GO (Blast)

42 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
Golgi membrane Hs cellular component 867 0.0
transporter activity Hs molecular function 867 0.0
binding Hs molecular function 867 0.0
protein binding Hs molecular function 867 0.0
cytoplasm Hs cellular component 867 0.0
lysosomal membrane Hs cellular component 867 0.0
endosome Hs cellular component 711 0.0
Golgi apparatus Hs cellular component 867 0.0
Golgi-associated vesicle Hs cellular component 711 0.0
cytosol Hs cellular component 867 0.0
plasma membrane Hs cellular component 227 5.46e-62
clathrin-coated pit Hs cellular component 227 5.46e-62
protein C-terminus binding Hs molecular function 227 5.46e-62
endosome membrane Hs cellular component 711 0.0
membrane Hs cellular component 867 0.0
basolateral plasma membrane Hs cellular component 227 5.46e-62
apical plasma membrane Hs cellular component 227 5.46e-62
Rab GTPase binding Hs molecular function 867 0.0
kinesin binding Hs molecular function 867 0.0
protein kinase binding Hs molecular function 227 5.46e-62
membrane coat Hs cellular component 867 0.0
AP-type membrane coat adaptor complex Hs cellular component 867 0.0
AP-1 adaptor complex Hs cellular component 867 0.0
AP-2 adaptor complex Hs cellular component 227 5.46e-62
clathrin coat of trans-Golgi network vesicle Hs cellular component 227 5.46e-62
clathrin adaptor complex Hs cellular component 867 0.0
transport vesicle Hs cellular component 711 0.0
clathrin-coated vesicle Hs cellular component 867 0.0
cytoplasmic vesicle membrane Hs cellular component 867 0.0
clathrin-coated vesicle membrane Hs cellular component 867 0.0
endocytic vesicle membrane Hs cellular component 227 5.46e-62
clathrin-coated endocytic vesicle membrane Hs cellular component 227 5.46e-62
GTP-dependent protein binding Hs molecular function 867 0.0
cytoplasmic vesicle Hs cellular component 867 0.0
filopodium tip Hs cellular component 227 5.46e-62
trans-Golgi network membrane Hs cellular component 867 0.0
clathrin adaptor activity Hs molecular function 227 5.46e-62
endolysosome membrane Hs cellular component 227 5.46e-62
intracellular membrane-bounded organelle Hs cellular component 867 0.0
clathrin-coated endocytic vesicle Hs cellular component 227 5.46e-62
low-density lipoprotein particle receptor binding Hs molecular function 227 5.46e-62
recycling endosome Hs cellular component 867 0.0

GO (InterProScan)

7 results

GO Term Analysis Type e-value
binding SUPERFAMILY molecular function 6.37E-77
Golgi apparatus PIRSF cellular component 7.7E-217
intracellular protein transport Pfam biological process 4.0E-100
vesicle-mediated transport PIRSF biological process 7.7E-217
membrane coat Pfam cellular component 4.0E-100
AP-1 adaptor complex PIRSF cellular component 7.7E-217
clathrin adaptor complex SMART cellular component 2.2E-40

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