Aniseed - Gene card

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Genoscope Yasuo Villefranche

2 results

AHC0AAA259YD01

Plate: Plate_259_D01

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

15 results

IPR Term	Analysis	Definition
Vinculin-bd_dom	Pfam	Vinculin-binding site-containing domain
I/LWEQ_dom_sf	SUPERFAMILY	I/LWEQ domain superfamily
PH-like_dom_sf	Gene3D	PH-like domain superfamily
FERM_N	Pfam	FERM, N-terminal
Alpha-catenin/vinculin-like_sf	SUPERFAMILY	Alpha-catenin/vinculin-like superfamily
FERM_domain	ProSiteProfiles	FERM domain
Talin_cent	Pfam	Talin, central
ILWEQ_dom	SMART	I/LWEQ domain
FERM_central	CDD	FERM central domain
Band_41_domain	SMART	Band 4.1 domain
FERM_f0	Pfam	Talin, N-terminal F0 domain
Talin_cent_sf	SUPERFAMILY	Talin, central domain superfamily
FERM_2	SUPERFAMILY	FERM superfamily, second domain
FERM/acyl-CoA-bd_prot_sf	Gene3D	FERM/acyl-CoA-binding protein superfamily
FERM_central	Pfam	FERM central domain

GOSlim

32 results

GO Term	Annotation Origin	Type
actin binding	Orthology	molecular function
integrin binding	Orthology	molecular function
structural molecule activity	Orthology	molecular function
protein binding	Orthology	molecular function
extracellular region	Orthology	cellular component
cytoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
cytoskeleton	Orthology	cellular component
plasma membrane	Orthology	cellular component
focal adhesion	Orthology	cellular component
cell adhesion	Orthology	biological process
cytoskeletal protein binding	Orthology	molecular function
cell surface	Orthology	cellular component
membrane	Orthology	cellular component
cell junction	Orthology	cellular component
cell projection	Orthology	cellular component
apical part of cell	Blast	cellular component
synapse	Orthology	cellular component
actin filament binding	Orthology	molecular function
extracellular exosome	Orthology	cellular component
plasma membrane region	Orthology	cellular component
cell leading edge	Orthology	cellular component
anion binding	Orthology	molecular function
membrane organization	Orthology	biological process
organelle organization	Orthology	biological process
cell	Orthology	cellular component
cellular protein localization	Orthology	biological process
cell surface receptor signaling pathway	Orthology	biological process
cell projection membrane	Orthology	cellular component
cell adhesion molecule binding	Orthology	molecular function
blood coagulation	Orthology	biological process
cellular process	Orthology	biological process

GO (Orthology)

36 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
ruffle	Hs	cellular component
phosphatidylserine binding	Hs	molecular function
platelet degranulation	Hs	biological process
actin binding	Hs	molecular function
integrin binding	Hs	molecular function
structural molecule activity	Hs	molecular function
structural constituent of cytoskeleton	Hs	molecular function
protein binding	Hs	molecular function
extracellular region	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
cytoskeleton	Hs	cellular component
plasma membrane	Hs	cellular component
focal adhesion	Hs	cellular component
muscle contraction	Hs	biological process
cytoskeletal anchoring at plasma membrane	Hs	biological process
cell-cell junction assembly	Hs	biological process
cell-substrate junction assembly	Hs	biological process
cell adhesion	Hs	biological process
integrin-mediated signaling pathway	Hs	biological process
cell surface	Hs	cellular component
actin cytoskeleton	Hs	cellular component
membrane	Hs	cellular component
viral process	Hs	biological process
vinculin binding	Hs	molecular function
cell junction	Hs	cellular component
LIM domain binding	Hs	molecular function
cortical actin cytoskeleton organization	Hs	biological process
ruffle membrane	Hs	cellular component
phosphatidylinositol binding	Hs	molecular function
cell projection	Hs	cellular component
synapse	Hs	cellular component
cadherin binding	Hs	molecular function
actin filament binding	Hs	molecular function
extracellular exosome	Hs	cellular component
platelet aggregation	Hs	biological process

GO (Blast)

29 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
ruffle	Hs	cellular component	1601	0.0
phosphatidylserine binding	Hs	molecular function	1601	0.0
actin binding	Hs	molecular function	1601	0.0
integrin binding	Hs	molecular function	1601	0.0
structural molecule activity	Hs	molecular function	1593	0.0
structural constituent of cytoskeleton	Hs	molecular function	1601	0.0
protein binding	Hs	molecular function	1601	0.0
extracellular region	Hs	cellular component	1601	0.0
cytoplasm	Hs	cellular component	1601	0.0
cytosol	Hs	cellular component	1601	0.0
cytoskeleton	Hs	cellular component	1601	0.0
plasma membrane	Hs	cellular component	1601	0.0
bicellular tight junction	Hs	cellular component	59.7	1.28e-08
focal adhesion	Hs	cellular component	1601	0.0
cytoskeletal protein binding	Hs	molecular function	59.7	1.28e-08
cell surface	Hs	cellular component	1601	0.0
actin cytoskeleton	Hs	cellular component	1593	0.0
membrane	Hs	cellular component	1601	0.0
vinculin binding	Hs	molecular function	1601	0.0
cell junction	Hs	cellular component	1601	0.0
LIM domain binding	Hs	molecular function	1601	0.0
ruffle membrane	Hs	cellular component	1601	0.0
phosphatidylinositol binding	Hs	molecular function	1601	0.0
cell projection	Hs	cellular component	1601	0.0
apical part of cell	Hs	cellular component	59.7	1.28e-08
synapse	Hs	cellular component	1593	0.0
cadherin binding	Hs	molecular function	1601	0.0
actin filament binding	Hs	molecular function	1601	0.0
extracellular exosome	Hs	cellular component	1601	0.0

GO (InterProScan)

8 results

GO Term	Analysis	Type	e-value
ruffle	Pfam	cellular component	3.1E-54
actin binding	SUPERFAMILY	molecular function	1.44E-44
structural constituent of cytoskeleton	Pfam	molecular function	3.1E-54
cytoskeleton	ProSiteProfiles	cellular component	45.541
focal adhesion	Pfam	cellular component	3.1E-54
cytoskeletal anchoring at plasma membrane	Pfam	biological process	3.1E-54
cell adhesion	SUPERFAMILY	biological process	2.82E-32
actin filament binding	SUPERFAMILY	molecular function	2.82E-32

Gene Card

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