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GENE CARD

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Gene Card

Best human hits

COMP; THBS3; THBS4

Species

P.mammillata

Unique Gene ID

Phmamm.g00005315

Gene Model ID

Phmamm.CG.MTP2014.S204.g05315

Location

S204:88912..95732

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

12 results

AHC0AAA31YF23

Plate: Plate_31_F23

AHC0AAA34YC21

Plate: Plate_34_C21

AHC0AAA75YD08

Plate: Plate_75_D08

AHC0AAA98YG17

Plate: Plate_98_G17

AHC0AAA181YC06

Plate: Plate_181_C06

AHC0AAA190YP12

Plate: Plate_190_P12

AHC0AAA194YP05

Plate: Plate_194_P05

AHC0AAA224YL16

Plate: Plate_224_L16

AHC0AAA230YO15

Plate: Plate_230_O15

AHC0AAA233YL19

Plate: Plate_233_L19

AHC0AAA261YC23

Plate: Plate_261_C23

AHC0AAA98YI19

Plate: Plate_98_I19

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

15 results

IPR Term Analysis Definition
ConA-like_dom_sf SUPERFAMILY Concanavalin A-like lectin/glucanase domain superfamily
Thrombospondin_3_rpt ProSiteProfiles Thrombospondin, type 3 repeat
EGF-like_dom ProSiteProfiles EGF-like domain
Thrombospondin PANTHER Thrombospondin
Thrombospondin_C ProSiteProfiles Thrombospondin, C-terminal
TSP_type-3_rpt SUPERFAMILY TSP type-3 repeat
EGF-like_Ca-bd_dom SMART EGF-like calcium-binding domain
Thrombospondin_C Pfam Thrombospondin, C-terminal
EGF-like_Ca-bd_dom Pfam EGF-like calcium-binding domain
Thrombospondin_3-like_rpt Pfam Thrombospondin, type 3-like repeat
TSP_type-3_rpt Gene3D TSP type-3 repeat
EGF_Ca-bd_CS ProSitePatterns EGF-like calcium-binding, conserved site
EGF-like_dom SMART EGF-like domain
Growth_fac_rcpt_cys_sf SUPERFAMILY Growth factor receptor cysteine-rich domain superfamily
EGF-like_CS ProSitePatterns EGF-like, conserved site

GOSlim

20 results

GO Term Annotation Origin Type
integrin binding Blast molecular function
calcium ion binding Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
extracellular space Blast cellular component
endoplasmic reticulum Blast cellular component
cell adhesion InterProScan biological process
extracellular matrix organization InterProScan biological process
perinuclear region of cytoplasm Blast cellular component
extracellular exosome Blast cellular component
enzyme binding Blast molecular function
extracellular region part Blast cellular component
structural molecule activity Blast molecular function
macromolecular complex binding Blast molecular function
receptor binding Blast molecular function
molecular function regulator Blast molecular function
regulation of signal transduction Blast biological process
signaling receptor activity Blast molecular function
anion binding Blast molecular function
carbohydrate derivative binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
protease binding Hs molecular function 575 0.0
integrin binding Hs molecular function 626 0.0
extracellular matrix structural constituent Hs molecular function 575 0.0
calcium ion binding Hs molecular function 650 0.0
protein binding Hs molecular function 626 0.0
collagen binding Hs molecular function 575 0.0
extracellular region Hs cellular component 650 0.0
proteinaceous extracellular matrix Hs cellular component 626 0.0
basement membrane Hs cellular component 626 0.0
extracellular space Hs cellular component 626 0.0
endoplasmic reticulum Hs cellular component 626 0.0
growth factor activity Hs molecular function 626 0.0
heparin binding Hs molecular function 650 0.0
sarcoplasmic reticulum Hs cellular component 626 0.0
extracellular matrix Hs cellular component 650 0.0
heparan sulfate proteoglycan binding Hs molecular function 575 0.0
perinuclear region of cytoplasm Hs cellular component 650 0.0
extracellular exosome Hs cellular component 626 0.0

GO (InterProScan)

5 results

GO Term Analysis Type e-value
calcium ion binding Pfam molecular function 7.8E-95
extracellular region Pfam cellular component 7.8E-95
cell adhesion Pfam biological process 7.8E-95
extracellular matrix organization PANTHER biological process 0.0
extracellular matrix PANTHER cellular component 0.0