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Gene Card

Best human hits

VAMP1; VAMP2; VAMP3

Species

P.mammillata

Unique Gene ID

Phmamm.g00005206

Gene Model ID

Phmamm.CG.MTP2014.S199.g05206

Location

S199:107996..109612

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S199.g05206.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

28 results

AHC0AAA16YM08

Plate: Plate_16_M08

AHC0AAA18YD15

Plate: Plate_18_D15

AHC0AAA2YF04

Plate: Plate_2_F04

AHC0AAA29YH11

Plate: Plate_29_H11

AHC0AAA38YA09

Plate: Plate_38_A09

AHC0AAA46YI12

Plate: Plate_46_I12

AHC0AAA73YJ09

Plate: Plate_73_J09

AHC0AAA74YJ13

Plate: Plate_74_J13

AHC0AAA104YA10

Plate: Plate_104_A10

AHC0AAA104YD19

Plate: Plate_104_D19

AHC0AAA105YP03

Plate: Plate_105_P03

AHC0AAA122YJ11

Plate: Plate_122_J11

AHC0AAA123YI05

Plate: Plate_123_I05

AHC0AAA138YD23

Plate: Plate_138_D23

AHC0AAA154YG01

Plate: Plate_154_G01

AHC0AAA89YB02

Plate: Plate_89_B02

AHC0AAA92YI23

Plate: Plate_92_I23

AHC0AAA97YN02

Plate: Plate_97_N02

AHC0AAA159YJ07

Plate: Plate_159_J07

AHC0AAA166YJ06

Plate: Plate_166_J06

AHC0AAA171YE22

Plate: Plate_171_E22

AHC0AAA189YM02

Plate: Plate_189_M02

AHC0AAA211YO14

Plate: Plate_211_O14

AHC0AAA241YK06

Plate: Plate_241_K06

AHC0AAA255YO05

Plate: Plate_255_O05

AHC0AAA267YF20

Plate: Plate_267_F20

AHC0AAA38YC11

Plate: Plate_38_C11

AHC0AAA92YI21

Plate: Plate_92_I21

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Synaptobrevin ProSiteProfiles Synaptobrevin
Synaptobrevin PRINTS Synaptobrevin
Synaptobrevin Pfam Synaptobrevin
Synaptobrevin ProSitePatterns Synaptobrevin

GOSlim

44 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
calmodulin binding Blast molecular function
intracellular Orthology cellular component
mitochondrion Blast cellular component
cytosol Orthology cellular component
plasma membrane Orthology cellular component
integral component of plasma membrane Blast cellular component
cell surface Orthology cellular component
protein transport Orthology biological process
membrane Orthology cellular component
integral component of membrane Orthology cellular component
apical plasma membrane Orthology cellular component
cell junction Orthology cellular component
cytoplasmic vesicle Orthology cellular component
vesicle Blast cellular component
neuron projection Orthology cellular component
intracellular organelle Orthology cellular component
intracellular membrane-bounded organelle Orthology cellular component
synapse Orthology cellular component
perinuclear region of cytoplasm Orthology cellular component
membrane organization Orthology biological process
extracellular exosome Blast cellular component
organelle organization Orthology biological process
endomembrane system Orthology cellular component
intracellular organelle part Orthology cellular component
whole membrane Orthology cellular component
bounding membrane of organelle Orthology cellular component
cytoplasmic part Orthology cellular component
membrane part Orthology cellular component
macromolecular complex Orthology cellular component
Golgi membrane Orthology cellular component
cell adhesion Orthology biological process
cell morphogenesis involved in differentiation Orthology biological process
establishment of protein localization to membrane Orthology biological process
endosome Orthology cellular component
innate immune response Orthology biological process
anion binding Blast molecular function
mitochondrial membrane Blast cellular component
Golgi apparatus part Blast cellular component
synapse part Blast cellular component
neuron part Blast cellular component
organelle membrane Blast cellular component
cell projection part Blast cellular component
axon Blast cellular component

GO (Orthology)

43 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
SNARE binding Hs molecular function
positive regulation of receptor recycling Hs biological process
SNAP receptor activity Hs molecular function
protein binding Hs molecular function
intracellular Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
exocytosis Hs biological process
vesicle docking involved in exocytosis Hs biological process
vesicle fusion Hs biological process
cell surface Hs cellular component
protein transport Hs biological process
membrane Hs cellular component
integral component of membrane Hs cellular component
vesicle-mediated transport Hs biological process
apical plasma membrane Hs cellular component
syntaxin-1 binding Hs molecular function
calcium ion regulated exocytosis Hs biological process
cell junction Hs cellular component
transport vesicle Hs cellular component
clathrin-coated vesicle Hs cellular component
secretory granule Hs cellular component
clathrin-coated vesicle membrane Hs cellular component
phagocytic vesicle membrane Hs cellular component
SNARE complex Hs cellular component
cytoplasmic vesicle Hs cellular component
trans-Golgi network membrane Hs cellular component
substrate adhesion-dependent cell spreading Hs biological process
SNARE complex assembly Hs biological process
retrograde transport, endosome to Golgi Hs biological process
Golgi to plasma membrane protein transport Hs biological process
neuron projection Hs cellular component
intracellular organelle Hs cellular component
intracellular membrane-bounded organelle Hs cellular component
synapse Hs cellular component
phagocytic vesicle Hs cellular component
perinuclear region of cytoplasm Hs cellular component
recycling endosome Hs cellular component
recycling endosome membrane Hs cellular component
membrane organization Hs biological process
membrane fusion Hs biological process
cellular response to interferon-gamma Hs biological process
negative regulation of secretion by cell Hs biological process

GO (Blast)

55 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
SNARE binding Hs molecular function 125 8.79e-39
SNAP receptor activity Hs molecular function 125 8.79e-39
protein binding Hs molecular function 125 8.79e-39
calmodulin binding Hs molecular function 120 5.62e-37
phospholipid binding Hs molecular function 120 5.62e-37
intracellular Hs cellular component 125 8.79e-39
mitochondrion Hs cellular component 119 1.98e-36
mitochondrial outer membrane Hs cellular component 119 1.98e-36
trans-Golgi network Hs cellular component 120 5.62e-37
cytosol Hs cellular component 125 8.79e-39
plasma membrane Hs cellular component 125 8.79e-39
integral component of plasma membrane Hs cellular component 120 5.62e-37
synaptic vesicle Hs cellular component 120 5.62e-37
voltage-gated potassium channel complex Hs cellular component 120 5.62e-37
cell surface Hs cellular component 125 8.79e-39
membrane Hs cellular component 125 8.79e-39
integral component of membrane Hs cellular component 125 8.79e-39
apical plasma membrane Hs cellular component 125 8.79e-39
syntaxin-1 binding Hs molecular function 125 8.79e-39
syntaxin binding Hs molecular function 120 5.62e-37
cell junction Hs cellular component 125 8.79e-39
transport vesicle Hs cellular component 125 8.79e-39
clathrin-coated vesicle Hs cellular component 125 8.79e-39
secretory granule Hs cellular component 125 8.79e-39
cytoplasmic vesicle membrane Hs cellular component 119 1.98e-36
clathrin-coated vesicle membrane Hs cellular component 125 8.79e-39
secretory granule membrane Hs cellular component 120 5.62e-37
phagocytic vesicle membrane Hs cellular component 125 8.79e-39
synaptic vesicle membrane Hs cellular component 120 5.62e-37
SNARE complex Hs cellular component 125 8.79e-39
cytoplasmic vesicle Hs cellular component 125 8.79e-39
vesicle Hs cellular component 120 5.62e-37
trans-Golgi network membrane Hs cellular component 125 8.79e-39
specific granule membrane Hs cellular component 119 1.98e-36
zymogen granule membrane Hs cellular component 120 5.62e-37
neuron projection Hs cellular component 125 8.79e-39
terminal bouton Hs cellular component 119 1.98e-36
intracellular organelle Hs cellular component 125 8.79e-39
intracellular membrane-bounded organelle Hs cellular component 125 8.79e-39
protein self-association Hs molecular function 120 5.62e-37
neuron projection terminus Hs cellular component 120 5.62e-37
synapse Hs cellular component 125 8.79e-39
phagocytic vesicle Hs cellular component 125 8.79e-39
calcium-dependent protein binding Hs molecular function 120 5.62e-37
perinuclear region of cytoplasm Hs cellular component 125 8.79e-39
recycling endosome Hs cellular component 125 8.79e-39
recycling endosome membrane Hs cellular component 125 8.79e-39
clathrin-sculpted glutamate transport vesicle membrane Hs cellular component 120 5.62e-37
clathrin-sculpted gamma-aminobutyric acid transport vesicle membrane Hs cellular component 120 5.62e-37
synaptobrevin 2-SNAP-25-syntaxin-1a-complexin I complex Hs cellular component 120 5.62e-37
synaptobrevin 2-SNAP-25-syntaxin-1a-complexin II complex Hs cellular component 120 5.62e-37
synaptobrevin 2-SNAP-25-syntaxin-1a complex Hs cellular component 120 5.62e-37
extracellular exosome Hs cellular component 120 5.62e-37
clathrin-sculpted monoamine transport vesicle membrane Hs cellular component 120 5.62e-37
tertiary granule membrane Hs cellular component 119 1.98e-36

GO (InterProScan)

2 results

GO Term Analysis Type e-value
integral component of membrane Pfam cellular component 1.2E-26
vesicle-mediated transport Pfam biological process 1.2E-26

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