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Gene Card

Best human hits

BIRC6; UBE2O; UBE2Z

Species

P.mammillata

Unique Gene ID

Phmamm.g00015944

Gene Model ID

Phmamm.CG.MTP2014.S1944.g15944

Location

S1944:19453..23477

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S1944.g15944.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

5 results

AHC0AAA17YI07

Plate: Plate_17_I07

AHC0AAA53YE20

Plate: Plate_53_E20

AHC0AAA109YO18

Plate: Plate_109_O18

AHC0AAA245YA03

Plate: Plate_245_A03

AHC0AAA257YK21

Plate: Plate_257_K21

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
UBQ-conjugat_E2 ProSiteProfiles Ubiquitin-conjugating enzyme E2
UBQ-conjugat_E2 Pfam Ubiquitin-conjugating enzyme E2
UBQ-conjugat_E2 CDD Ubiquitin-conjugating enzyme E2
UBQ-conjugating_enzyme/RWD SUPERFAMILY Ubiquitin-conjugating enzyme/RWD-like
UBQ-conjugating_enzyme/RWD Gene3D Ubiquitin-conjugating enzyme/RWD-like

GOSlim

31 results

GO Term Annotation Origin Type
nucleotide binding Orthology molecular function
RNA binding Orthology molecular function
ubiquitin-protein transferase activity Orthology molecular function
protein binding Orthology molecular function
ATP binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Blast cellular component
cytoplasm Orthology cellular component
endosome Blast cellular component
Golgi apparatus Blast cellular component
microtubule organizing center Blast cellular component
cytosol Orthology cellular component
cytoskeleton Blast cellular component
membrane Blast cellular component
protein ubiquitination Orthology biological process
nuclear body Orthology cellular component
transferase activity Orthology molecular function
midbody Blast cellular component
ubiquitin protein ligase binding Orthology molecular function
cell surface receptor signaling pathway Orthology biological process
regulation of transcription from RNA polymerase II promoter Orthology biological process
cellular response to organic substance Orthology biological process
positive regulation of signal transduction Orthology biological process
protein polyubiquitination Orthology biological process
cytoskeletal part Blast cellular component
microtubule cytoskeleton Blast cellular component
endopeptidase activity Blast molecular function
enzyme regulator activity Blast molecular function
enzyme binding Blast molecular function
Golgi apparatus part Blast cellular component
peptidase activity Blast molecular function

GO (Orthology)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
nucleotide binding Hs molecular function
RNA binding Hs molecular function
ubiquitin-protein transferase activity Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
protein monoubiquitination Hs biological process
protein ubiquitination Hs biological process
nuclear body Hs cellular component
transferase activity Hs molecular function
positive regulation of BMP signaling pathway Hs biological process
ubiquitin protein ligase binding Hs molecular function
retrograde transport, endosome to Golgi Hs biological process
ubiquitin protein ligase activity Hs molecular function
ubiquitin conjugating enzyme activity Hs molecular function
protein K63-linked ubiquitination Hs biological process

GO (Blast)

25 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 254 7.43e-74
spindle pole Hs cellular component 145 1.38e-36
RNA binding Hs molecular function 254 7.43e-74
ubiquitin-protein transferase activity Hs molecular function 254 7.43e-74
cysteine-type endopeptidase inhibitor activity Hs molecular function 145 1.38e-36
protein binding Hs molecular function 254 7.43e-74
ATP binding Hs molecular function 254 7.43e-74
nucleus Hs cellular component 254 7.43e-74
nucleoplasm Hs cellular component 107 2.36e-25
cytoplasm Hs cellular component 254 7.43e-74
endosome Hs cellular component 145 1.38e-36
Golgi apparatus Hs cellular component 145 1.38e-36
trans-Golgi network Hs cellular component 145 1.38e-36
microtubule organizing center Hs cellular component 145 1.38e-36
cytosol Hs cellular component 254 7.43e-74
cytoskeleton Hs cellular component 145 1.38e-36
membrane Hs cellular component 145 1.38e-36
nuclear body Hs cellular component 254 7.43e-74
transferase activity Hs molecular function 254 7.43e-74
peptidase inhibitor activity Hs molecular function 145 1.38e-36
midbody Hs cellular component 145 1.38e-36
ubiquitin protein ligase binding Hs molecular function 254 7.43e-74
ubiquitin protein ligase activity Hs molecular function 254 7.43e-74
ubiquitin conjugating enzyme activity Hs molecular function 254 7.43e-74
Flemming body Hs cellular component 145 1.38e-36

GO (InterProScan)

No result

GO Term Analysis Type e-value

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