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Gene Card

Best human hits

EIF4G1; EIF4G2; EIF4G3

Species

P.mammillata

Unique Gene ID

Phmamm.g00005045

Gene Model ID

Phmamm.CG.MTP2014.S190.g05045

Location

S190:6636..17529

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S190.g05045.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

11 results

AHC0AAA24YI20

Plate: Plate_24_I20

AHC0AAA7YM18

Plate: Plate_7_M18

AHC0AAA109YN08

Plate: Plate_109_N08

AHC0AAA152YA20

Plate: Plate_152_A20

AHC0AAA162YB08

Plate: Plate_162_B08

AHC0AAA167YK08

Plate: Plate_167_K08

AHC0AAA175YA08

Plate: Plate_175_A08

AHC0AAA179YE18

Plate: Plate_179_E18

AHC0AAA194YP03

Plate: Plate_194_P03

AHC0AAA196YG19

Plate: Plate_196_G19

AHC0AAA215YH16

Plate: Plate_215_H16

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

11 results

IPR Term Analysis Definition
MIF4-like_sf Gene3D MIF4G-like domain superfamily
Initiation_fac_eIF4g_MI ProSiteProfiles Initiation factor eIF-4 gamma, MA3
ARM-type_fold SUPERFAMILY Armadillo-type fold
W2_domain ProSiteProfiles W2 domain
W2_domain SMART W2 domain
Initiation_fac_eIF4g_MI Pfam Initiation factor eIF-4 gamma, MA3
EIF4G3 PANTHER Eukaryotic translation initiation factor 4 gamma 3
MIF4G-like_typ-3 SMART MIF4G-like, type 3
W2_domain Pfam W2 domain
MIF4G-like_typ-3 Pfam MIF4G-like, type 3
Initiation_fac_eIF4g_MI SMART Initiation factor eIF-4 gamma, MA3

GOSlim

18 results

GO Term Annotation Origin Type
RNA binding Blast molecular function
binding Blast molecular function
protein binding Blast molecular function
ATP binding Blast molecular function
nucleus Blast cellular component
cytoplasm Blast cellular component
cytosol Blast cellular component
translational initiation Blast biological process
membrane Blast cellular component
axon Blast cellular component
identical protein binding Blast molecular function
regulation of gene expression Blast biological process
macromolecular complex Blast cellular component
adherens junction Blast cellular component
cytoplasmic part Blast cellular component
intracellular organelle part Blast cellular component
ribosome Blast cellular component
cell adhesion molecule binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

22 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA cap binding Hs molecular function 573 5.84e-178
RNA binding Hs molecular function 573 5.84e-178
mRNA binding Hs molecular function 569 8.95e-178
translation initiation factor activity Hs molecular function 573 5.84e-178
binding Hs molecular function 573 5.84e-178
protein binding Hs molecular function 573 5.84e-178
ATP binding Hs molecular function 569 8.95e-178
nucleus Hs cellular component 569 8.95e-178
cytoplasm Hs cellular component 569 8.95e-178
cytosol Hs cellular component 573 5.84e-178
polysome Hs cellular component 569 8.95e-178
cell-cell adherens junction Hs cellular component 231 1.56e-62
translation factor activity, RNA binding Hs molecular function 573 5.84e-178
eukaryotic initiation factor 4E binding Hs molecular function 569 8.95e-178
membrane Hs cellular component 569 8.95e-178
eukaryotic translation initiation factor 4F complex Hs cellular component 573 5.84e-178
cytosolic small ribosomal subunit Hs cellular component 569 8.95e-178
axon Hs cellular component 231 1.56e-62
translation initiation factor binding Hs molecular function 569 8.95e-178
protein complex scaffold activity Hs molecular function 569 8.95e-178
identical protein binding Hs molecular function 569 8.95e-178
cadherin binding Hs molecular function 569 8.95e-178

GO (InterProScan)

5 results

GO Term Analysis Type e-value
RNA cap binding PANTHER molecular function 7.8E-215
RNA binding Pfam molecular function 3.7E-56
translation initiation factor activity PANTHER molecular function 7.8E-215
binding SUPERFAMILY molecular function 7.1E-63
protein binding Pfam molecular function 3.7E-56

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