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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S1...'

Gene Card

Best human hits

KLF13; ZNF701

Species

P.mammillata

Unique Gene ID

Phmamm.g00004888

Gene Model ID

Phmamm.CG.MTP2014.S182.g04888

Location

S182:9489..17753

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S182.g04888.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

1 result

AHC0AAA212YI03

Plate: Plate_212_I03

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Znf_C2H2_type ProSitePatterns Zinc finger C2H2-type
Znf_C2H2_type ProSiteProfiles Zinc finger C2H2-type
Znf_C2H2_type SMART Zinc finger C2H2-type
Znf_C2H2_type Pfam Zinc finger C2H2-type
Znf_C2H2_sf SUPERFAMILY Zinc finger C2H2 superfamily

GOSlim

9 results

GO Term Annotation Origin Type
RNA polymerase II core promoter proximal region sequence-specific DNA binding Blast molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Blast molecular function
nucleic acid binding Blast molecular function
DNA binding Blast molecular function
transcription factor activity, sequence-specific DNA binding Blast molecular function
protein binding Blast molecular function
intracellular Blast cellular component
nucleus Blast cellular component
metal ion binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 70.5 2.47e-13
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 70.5 2.47e-13
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 70.5 2.47e-13
nucleic acid binding Hs molecular function 71.6 3.10e-13
DNA binding Hs molecular function 71.6 3.10e-13
transcription factor activity, sequence-specific DNA binding Hs molecular function 71.6 3.10e-13
protein binding Hs molecular function 70.5 2.47e-13
intracellular Hs cellular component 71.6 3.10e-13
nucleus Hs cellular component 71.6 3.10e-13
metal ion binding Hs molecular function 71.6 3.10e-13

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding Pfam molecular function 1.1E-5