Aniseed - Gene card

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Genoscope Yasuo Villefranche

2 results

AHC0AAA260YE14

Plate: Plate_260_E14

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Regulatory Regions

No result

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Gene Annotations

InterPro

9 results

IPR Term	Analysis	Definition
bHLH_dom	ProSiteProfiles	Myc-type, basic helix-loop-helix (bHLH) domain
bHLH_dom	Pfam	Myc-type, basic helix-loop-helix (bHLH) domain
HLH_DNA-bd_sf	Gene3D	Helix-loop-helix DNA-binding domain superfamily
Orange_dom	SMART	Orange domain
bHLH_dom	SMART	Myc-type, basic helix-loop-helix (bHLH) domain
bHLH_dom	CDD	Myc-type, basic helix-loop-helix (bHLH) domain
HLH_DNA-bd_sf	SUPERFAMILY	Helix-loop-helix DNA-binding domain superfamily
Orange_dom	ProSiteProfiles	Orange domain
Orange_dom	Pfam	Orange domain

GOSlim

25 results

GO Term	Annotation Origin	Type
negative regulation of transcription from RNA polymerase II promoter	Orthology	biological process
RNA polymerase II regulatory region sequence-specific DNA binding	Orthology	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
DNA binding	Orthology	molecular function
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
transcription cofactor activity	Orthology	molecular function
protein binding	Blast	molecular function
intracellular	Blast	cellular component
nucleus	Orthology	cellular component
nucleoplasm	Blast	cellular component
cytoplasm	Blast	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
regulation of transcription from RNA polymerase II promoter	Orthology	biological process
multicellular organism development	Orthology	biological process
nervous system development	Orthology	biological process
transcription factor binding	Orthology	molecular function
cell differentiation	Orthology	biological process
protein homodimerization activity	Blast	molecular function
sequence-specific DNA binding	Blast	molecular function
protein dimerization activity	Orthology	molecular function
intracellular part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
enzyme binding	Blast	molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Blast	molecular function

GO (Orthology)

16 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function
DNA binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
transcription cofactor activity	Hs	molecular function
nucleus	Hs	cellular component
transcription factor complex	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
multicellular organism development	Hs	biological process
nervous system development	Hs	biological process
transcription factor binding	Hs	molecular function
cell differentiation	Hs	biological process
protein dimerization activity	Hs	molecular function

GO (Blast)

20 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function	90.1	5.63e-21
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	147	4.90e-42
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	147	4.90e-42
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	90.1	5.63e-21
DNA binding	Hs	molecular function	147	4.90e-42
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	147	4.90e-42
transcription cofactor activity	Hs	molecular function	90.1	5.63e-21
protein binding	Hs	molecular function	147	4.90e-42
intracellular	Hs	cellular component	147	4.90e-42
nucleus	Hs	cellular component	147	4.90e-42
nucleoplasm	Hs	cellular component	147	4.90e-42
transcription factor complex	Hs	cellular component	90.1	5.63e-21
cytoplasm	Hs	cellular component	147	4.90e-42
transcription factor binding	Hs	molecular function	147	4.90e-42
protein homodimerization activity	Hs	molecular function	147	4.90e-42
histone deacetylase binding	Hs	molecular function	147	4.90e-42
sequence-specific DNA binding	Hs	molecular function	147	4.90e-42
protein dimerization activity	Hs	molecular function	147	4.90e-42
chaperone binding	Hs	molecular function	147	4.90e-42
N-box binding	Hs	molecular function	147	4.90e-42

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
DNA binding	Pfam	molecular function	3.1E-13
regulation of transcription, DNA-templated	Pfam	biological process	3.1E-13
protein dimerization activity	Gene3D	molecular function	6.0E-24

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