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GENE CARD

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Gene Card

Best human hits

MTF1; ZNF143; ZNF76

Species

P.mammillata

Unique Gene ID

Phmamm.g00015575

Gene Model ID

Phmamm.CG.MTP2014.S1751.g15575

Location

S1751:970..11734

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S1751.g15575.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

6 results

AHC0AAA103YD16

Plate: Plate_103_D16

AHC0AAA92YN03

Plate: Plate_92_N03

AHC0AAA173YG18

Plate: Plate_173_G18

AHC0AAA206YG03

Plate: Plate_206_G03

AHC0AAA206YP06

Plate: Plate_206_P06

AHC0AAA92YN01

Plate: Plate_92_N01

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Znf_C2H2_type ProSiteProfiles Zinc finger C2H2-type
Znf_C2H2_type ProSitePatterns Zinc finger C2H2-type
Znf_C2H2_sf SUPERFAMILY Zinc finger C2H2 superfamily
Znf_C2H2_type SMART Zinc finger C2H2-type
Metal_TF1 PANTHER Metal regulatory transcription factor 1
Znf_C2H2_type Pfam Zinc finger C2H2-type

GOSlim

16 results

GO Term Annotation Origin Type
RNA polymerase II core promoter proximal region sequence-specific DNA binding Blast molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Blast molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Blast molecular function
nucleic acid binding Orthology molecular function
DNA binding Blast molecular function
transcription factor activity, sequence-specific DNA binding Orthology molecular function
transcription coactivator activity Blast molecular function
protein binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
regulation of transcription, DNA-templated Orthology biological process
sequence-specific DNA binding Blast molecular function
metal ion binding Blast molecular function
intracellular Orthology cellular component
transcription regulatory region DNA binding Blast molecular function
enzyme binding Blast molecular function

GO (Orthology)

4 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
nucleic acid binding Hs molecular function
transcription factor activity, sequence-specific DNA binding Hs molecular function
regulation of transcription, DNA-templated Hs biological process
intracellular Hs cellular component

GO (Blast)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 312 1.04e-96
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 312 1.04e-96
core promoter binding Hs molecular function 312 1.04e-96
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 312 1.04e-96
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 172 2.45e-46
nucleic acid binding Hs molecular function 312 1.04e-96
DNA binding Hs molecular function 312 1.04e-96
transcription factor activity, sequence-specific DNA binding Hs molecular function 312 1.04e-96
transcription coactivator activity Hs molecular function 312 1.04e-96
protein binding Hs molecular function 312 1.04e-96
nucleus Hs cellular component 312 1.04e-96
nucleoplasm Hs cellular component 312 1.04e-96
histone acetyltransferase binding Hs molecular function 312 1.04e-96
sequence-specific DNA binding Hs molecular function 172 2.45e-46
metal ion binding Hs molecular function 312 1.04e-96

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding Pfam molecular function 4.2E-4

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