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GENE CARD

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Gene Card

Best human hits

RAB7A; RAB9A; RAB9B

Species

P.mammillata

Unique Gene ID

Phmamm.g00015401

Gene Model ID

Phmamm.CG.MTP2014.S1675.g15401

Location

S1675:20459..22059

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S1675.g15401.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

7 results

AHC0AAA35YM09

Plate: Plate_35_M09

AHC0AAA128YO09

Plate: Plate_128_O09

AHC0AAA144YH06

Plate: Plate_144_H06

AHC0AAA156YO01

Plate: Plate_156_O01

AHC0AAA87YA16

Plate: Plate_87_A16

AHC0AAA177YG14

Plate: Plate_177_G14

AHC0AAA240YA16

Plate: Plate_240_A16

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Small_GTP-bd_dom TIGRFAM Small GTP-binding protein domain
Small_GTPase Pfam Small GTPase superfamily
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase

GOSlim

51 results

GO Term Annotation Origin Type
Golgi membrane Blast cellular component
nucleotide binding Orthology molecular function
GTPase activity Orthology molecular function
protein binding Orthology molecular function
GTP binding Orthology molecular function
cytoplasm Orthology cellular component
lysosome Orthology cellular component
lysosomal membrane Orthology cellular component
endosome Orthology cellular component
endoplasmic reticulum Blast cellular component
endoplasmic reticulum membrane Blast cellular component
Golgi apparatus Orthology cellular component
cytosol Orthology cellular component
plasma membrane Orthology cellular component
protein transport Orthology biological process
membrane Orthology cellular component
cytoplasmic vesicle Orthology cellular component
melanosome Orthology cellular component
identical protein binding Blast molecular function
extracellular exosome Orthology cellular component
ubiquitin-like protein transferase activity Orthology molecular function
ligase activity Orthology molecular function
peptidase activity, acting on L-amino acid peptides Orthology molecular function
vacuolar membrane Orthology cellular component
intracellular non-membrane-bounded organelle Orthology cellular component
protein targeting Orthology biological process
establishment of protein localization to organelle Orthology biological process
organic substance metabolic process Orthology biological process
membrane organization Orthology biological process
organelle organization Orthology biological process
intracellular transport Orthology biological process
intracellular organelle part Orthology cellular component
whole membrane Orthology cellular component
bounding membrane of organelle Orthology cellular component
anion binding Orthology molecular function
guanyl ribonucleotide binding Orthology molecular function
purine ribonucleoside binding Orthology molecular function
immune system process Orthology biological process
cellular process Orthology biological process
endomembrane system Orthology cellular component
membrane part Orthology cellular component
macromolecular complex Orthology cellular component
cytoplasmic part Orthology cellular component
cell projection part Orthology cellular component
axon Orthology cellular component
synapse part Orthology cellular component
protein metabolic process Orthology biological process
enzyme binding Orthology molecular function
cell Orthology cellular component
macromolecular complex binding Orthology molecular function
organelle membrane Blast cellular component

GO (Orthology)

48 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
autophagosome assembly Hs biological process
nucleotide binding Hs molecular function
autophagosome membrane Hs cellular component
GTPase activity Hs molecular function
protein binding Hs molecular function
GTP binding Hs molecular function
cytoplasm Hs cellular component
lysosome Hs cellular component
lysosomal membrane Hs cellular component
endosome Hs cellular component
late endosome Hs cellular component
Golgi apparatus Hs cellular component
lipid droplet Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
protein targeting to lysosome Hs biological process
lipid metabolic process Hs biological process
endocytosis Hs biological process
autophagy Hs biological process
endosome to lysosome transport Hs biological process
endosome membrane Hs cellular component
protein transport Hs biological process
membrane Hs cellular component
lipid catabolic process Hs biological process
GDP binding Hs molecular function
antigen processing and presentation of exogenous peptide antigen via MHC class II Hs biological process
protein to membrane docking Hs biological process
secretory granule membrane Hs cellular component
phagocytic vesicle membrane Hs cellular component
retromer complex Hs cellular component
cytoplasmic vesicle Hs cellular component
late endosome membrane Hs cellular component
extrinsic component of lysosome membrane Hs cellular component
melanosome membrane Hs cellular component
pre-autophagosomal structure membrane Hs cellular component
retrograde transport, endosome to Golgi Hs biological process
terminal bouton Hs cellular component
early endosome to late endosome transport Hs biological process
phagocytic vesicle Hs cellular component
bone resorption Hs biological process
positive regulation of protein catabolic process Hs biological process
Rac GTPase binding Hs molecular function
extracellular exosome Hs cellular component
phagosome maturation Hs biological process
phagosome acidification Hs biological process
phagosome-lysosome fusion Hs biological process
alveolar lamellar body Hs cellular component
retromer complex binding Hs molecular function

GO (Blast)

39 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Golgi membrane Hs cellular component 179 1.27e-57
nucleotide binding Hs molecular function 317 8.90e-112
autophagosome membrane Hs cellular component 317 8.90e-112
GTPase activity Hs molecular function 317 8.90e-112
protein binding Hs molecular function 317 8.90e-112
GTP binding Hs molecular function 317 8.90e-112
cytoplasm Hs cellular component 317 8.90e-112
lysosome Hs cellular component 317 8.90e-112
lysosomal membrane Hs cellular component 317 8.90e-112
endosome Hs cellular component 317 8.90e-112
late endosome Hs cellular component 317 8.90e-112
endoplasmic reticulum Hs cellular component 179 1.27e-57
endoplasmic reticulum membrane Hs cellular component 179 1.27e-57
Golgi apparatus Hs cellular component 317 8.90e-112
lipid droplet Hs cellular component 317 8.90e-112
cytosol Hs cellular component 317 8.90e-112
plasma membrane Hs cellular component 317 8.90e-112
endosome membrane Hs cellular component 317 8.90e-112
membrane Hs cellular component 317 8.90e-112
GDP binding Hs molecular function 317 8.90e-112
transport vesicle Hs cellular component 179 1.27e-57
cytoplasmic vesicle membrane Hs cellular component 179 1.27e-57
secretory granule membrane Hs cellular component 317 8.90e-112
phagocytic vesicle membrane Hs cellular component 317 8.90e-112
retromer complex Hs cellular component 317 8.90e-112
cytoplasmic vesicle Hs cellular component 317 8.90e-112
late endosome membrane Hs cellular component 317 8.90e-112
extrinsic component of lysosome membrane Hs cellular component 317 8.90e-112
trans-Golgi network membrane Hs cellular component 179 1.27e-57
melanosome membrane Hs cellular component 317 8.90e-112
pre-autophagosomal structure membrane Hs cellular component 317 8.90e-112
melanosome Hs cellular component 179 1.27e-57
identical protein binding Hs molecular function 179 1.27e-57
terminal bouton Hs cellular component 317 8.90e-112
phagocytic vesicle Hs cellular component 317 8.90e-112
Rac GTPase binding Hs molecular function 317 8.90e-112
extracellular exosome Hs cellular component 317 8.90e-112
alveolar lamellar body Hs cellular component 317 8.90e-112
retromer complex binding Hs molecular function 317 8.90e-112

GO (InterProScan)

2 results

GO Term Analysis Type e-value
GTPase activity Pfam molecular function 1.7E-48
GTP binding Pfam molecular function 1.7E-48