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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S1...'

Gene Card

Best human hits

AC004223.3; RFFL; RNF34

Species

P.mammillata

Unique Gene ID

Phmamm.g00004562

Gene Model ID

Phmamm.CG.MTP2014.S165.g04562

Location

S165:48780..49614

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S165.g04562.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

8 results

AHC0AAA26YD08

Plate: Plate_26_D08

AHC0AAA59YC15

Plate: Plate_59_C15

AHC0AAA104YD03

Plate: Plate_104_D03

AHC0AAA124YC21

Plate: Plate_124_C21

AHC0AAA129YI05

Plate: Plate_129_I05

AHC0AAA149YD13

Plate: Plate_149_D13

AHC0AAA164YP22

Plate: Plate_164_P22

AHC0AAA200YC04

Plate: Plate_200_C04

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
Znf_RING/FYVE/PHD Gene3D Zinc finger, RING/FYVE/PHD-type
Znf_RING ProSiteProfiles Zinc finger, RING-type

GOSlim

25 results

GO Term Annotation Origin Type
DNA binding Blast molecular function
ubiquitin-protein transferase activity Blast molecular function
protein binding Blast molecular function
ATP binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
endosome Blast cellular component
cytosol Blast cellular component
plasma membrane Blast cellular component
endomembrane system Blast cellular component
membrane Blast cellular component
nuclear body Blast cellular component
nuclear speck Blast cellular component
transferase activity Blast molecular function
protein kinase binding Blast molecular function
ubiquitin protein ligase binding Blast molecular function
metal ion binding Blast molecular function
enzyme binding Blast molecular function
macromolecular complex Blast cellular component
nucleoside-triphosphatase activity Blast molecular function
intracellular organelle part Blast cellular component
whole membrane Blast cellular component
bounding membrane of organelle Blast cellular component
anion binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

26 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
protease binding Hs molecular function 125 1.06e-33
p53 binding Hs molecular function 125 1.06e-33
tumor necrosis factor receptor superfamily complex Hs cellular component 125 1.06e-33
DNA binding Hs molecular function 115 1.05e-30
ubiquitin-protein transferase activity Hs molecular function 84.0 3.26e-18
protein binding Hs molecular function 125 1.06e-33
ATP binding Hs molecular function 115 1.05e-30
nucleus Hs cellular component 84.0 3.26e-18
nucleoplasm Hs cellular component 125 1.06e-33
cytoplasm Hs cellular component 125 1.06e-33
endosome Hs cellular component 125 1.06e-33
cytosol Hs cellular component 125 1.06e-33
plasma membrane Hs cellular component 125 1.06e-33
DNA-dependent ATPase activity Hs molecular function 115 1.05e-30
endosome membrane Hs cellular component 125 1.06e-33
endomembrane system Hs cellular component 84.0 3.26e-18
membrane Hs cellular component 125 1.06e-33
nuclear body Hs cellular component 84.0 3.26e-18
nuclear speck Hs cellular component 84.0 3.26e-18
transferase activity Hs molecular function 125 1.06e-33
protein kinase binding Hs molecular function 125 1.06e-33
ubiquitin protein ligase binding Hs molecular function 125 1.06e-33
metal ion binding Hs molecular function 125 1.06e-33
recycling endosome membrane Hs cellular component 125 1.06e-33
ubiquitin protein ligase activity Hs molecular function 125 1.06e-33
phosphatidylinositol phosphate binding Hs molecular function 84.0 3.26e-18

GO (InterProScan)

No result

GO Term Analysis Type e-value

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