- Gene 'Phmamm.CG.MTP2014.S1...'
Gene Card
Best human hits
CNOT3
Species
Unique Gene ID
Phmamm.g00004550
Gene Model ID
Phmamm.CG.MTP2014.S164.g04550
Location
S164:149342..152375
Transcript Models and Sequences
Genoscope Yasuo Villefranche
14 results
AHC0AAA20YI02
Plate: Plate_20_I02
AHC0AAA46YK04
Plate: Plate_46_K04
AHC0AAA52YD06
Plate: Plate_52_D06
AHC0AAA53YG11
Plate: Plate_53_G11
AHC0AAA107YN12
Plate: Plate_107_N12
AHC0AAA128YP14
Plate: Plate_128_P14
AHC0AAA186YH22
Plate: Plate_186_H22
AHC0AAA190YI07
Plate: Plate_190_I07
AHC0AAA195YI12
Plate: Plate_195_I12
AHC0AAA227YJ03
Plate: Plate_227_J03
AHC0AAA255YB16
Plate: Plate_255_B16
AHC0AAA261YJ02
Plate: Plate_261_J02
AHC0AAA262YA06
Plate: Plate_262_A06
AHC0AAA268YF18
Plate: Plate_268_F18
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
4 results
| IPR Term | Analysis | Definition |
|---|---|---|
| NOT | Pfam | NOT2/NOT3/NOT5 |
| CCR4-NOT_su2/3/5_N_sf | Gene3D | CCR4-NOT complex subunit 2/3/5, N-terminal domain superfamily |
| CCR4-NOT_su3/5 | PIRSF | CCR4-NOT complex, subunit 3/ 5 |
| Not_N | Pfam | CCR4-Not complex component, Not N-terminal domain |
GOSlim
15 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| protein binding | Orthology | molecular function |
| nucleus | Orthology | cellular component |
| cytoplasm | Orthology | cellular component |
| cytosol | Orthology | cellular component |
| transcription, DNA-templated | Orthology | biological process |
| regulation of transcription, DNA-templated | Orthology | biological process |
| multicellular organism development | Orthology | biological process |
| nuclear-transcribed mRNA catabolic process | Orthology | biological process |
| cytoplasmic part | Orthology | cellular component |
| intracellular non-membrane-bounded organelle | Orthology | cellular component |
| macromolecular complex | Orthology | cellular component |
| regulation of gene expression | Orthology | biological process |
| negative regulation of gene expression | Orthology | biological process |
| intracellular part | Orthology | cellular component |
| cellular process | Orthology | biological process |
GO (Orthology)
15 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay | Hs | biological process |
| nuclear-transcribed mRNA poly(A) tail shortening | Hs | biological process |
| P-body | Hs | cellular component |
| protein binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| cytoplasm | Hs | cellular component |
| cytosol | Hs | cellular component |
| transcription, DNA-templated | Hs | biological process |
| regulation of transcription, DNA-templated | Hs | biological process |
| regulation of translation | Hs | biological process |
| multicellular organism development | Hs | biological process |
| negative regulation of translation | Hs | biological process |
| CCR4-NOT complex | Hs | cellular component |
| CCR4-NOT core complex | Hs | cellular component |
| gene silencing by RNA | Hs | biological process |
GO (Blast)
7 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| P-body | Hs | cellular component | 358 | 9.37e-114 |
| protein binding | Hs | molecular function | 358 | 9.37e-114 |
| nucleus | Hs | cellular component | 358 | 9.37e-114 |
| cytoplasm | Hs | cellular component | 358 | 9.37e-114 |
| cytosol | Hs | cellular component | 358 | 9.37e-114 |
| CCR4-NOT complex | Hs | cellular component | 358 | 9.37e-114 |
| CCR4-NOT core complex | Hs | cellular component | 358 | 9.37e-114 |
GO (InterProScan)
3 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| nucleus | Pfam | cellular component | 1.2E-90 |
| regulation of transcription, DNA-templated | PIRSF | biological process | 3.6E-137 |
| CCR4-NOT core complex | PANTHER | cellular component | 4.4E-243 |
