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GENE CARD

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Gene Card

Best human hits

NSMCE1

Species

P.mammillata

Unique Gene ID

Phmamm.g00004510

Gene Model ID

Phmamm.CG.MTP2014.S162.g04510

Location

S162:96776..101490

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

16 results

AHC0AAA17YL01

Plate: Plate_17_L01

AHC0AAA20YH01

Plate: Plate_20_H01

AHC0AAA3YI14

Plate: Plate_3_I14

AHC0AAA124YM07

Plate: Plate_124_M07

AHC0AAA137YJ18

Plate: Plate_137_J18

AHC0AAA143YG06

Plate: Plate_143_G06

AHC0AAA92YF05

Plate: Plate_92_F05

AHC0AAA158YG13

Plate: Plate_158_G13

AHC0AAA168YE11

Plate: Plate_168_E11

AHC0AAA184YF04

Plate: Plate_184_F04

AHC0AAA194YD19

Plate: Plate_194_D19

AHC0AAA196YJ20

Plate: Plate_196_J20

AHC0AAA200YN15

Plate: Plate_200_N15

AHC0AAA223YO07

Plate: Plate_223_O07

AHC0AAA260YP01

Plate: Plate_260_P01

AHC0AAA92YH07

Plate: Plate_92_H07

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Nse1 Pfam Non-structural maintenance of chromosomes element 1
Znf_RING-like Pfam Zinc finger, RING-like
Nse1 PANTHER Non-structural maintenance of chromosomes element 1
WH-like_DNA-bd_sf Gene3D Winged helix-like DNA-binding domain superfamily
Znf_RING-like CDD Zinc finger, RING-like
Znf_RING/FYVE/PHD Gene3D Zinc finger, RING/FYVE/PHD-type

GOSlim

16 results

GO Term Annotation Origin Type
ubiquitin-protein transferase activity Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
DNA repair Orthology biological process
cellular response to DNA damage stimulus Orthology biological process
protein ubiquitination Orthology biological process
transferase activity Orthology molecular function
intracellular signal transduction Orthology biological process
intracellular membrane-bounded organelle Orthology cellular component
metal ion binding Orthology molecular function
protein dimerization activity Orthology molecular function
intracellular organelle part Orthology cellular component
intracellular non-membrane-bounded organelle Orthology cellular component
DNA metabolic process Orthology biological process
macromolecular complex Orthology cellular component

GO (Orthology)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
double-strand break repair via homologous recombination Hs biological process
chromosome, telomeric region Hs cellular component
ubiquitin-protein transferase activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
chromosome Hs cellular component
DNA repair Hs biological process
postreplication repair Hs biological process
DNA recombination Hs biological process
cellular response to DNA damage stimulus Hs biological process
protein ubiquitination Hs biological process
transferase activity Hs molecular function
Smc5-Smc6 complex Hs cellular component
intracellular signal transduction Hs biological process
intracellular membrane-bounded organelle Hs cellular component
metal ion binding Hs molecular function
protein dimerization activity Hs molecular function
positive regulation of response to DNA damage stimulus Hs biological process

GO (Blast)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
chromosome, telomeric region Hs cellular component 159 8.61e-48
ubiquitin-protein transferase activity Hs molecular function 159 8.61e-48
protein binding Hs molecular function 159 8.61e-48
nucleus Hs cellular component 159 8.61e-48
nucleoplasm Hs cellular component 159 8.61e-48
chromosome Hs cellular component 159 8.61e-48
transferase activity Hs molecular function 159 8.61e-48
Smc5-Smc6 complex Hs cellular component 159 8.61e-48
intracellular membrane-bounded organelle Hs cellular component 159 8.61e-48
metal ion binding Hs molecular function 159 8.61e-48
protein dimerization activity Hs molecular function 159 8.61e-48

GO (InterProScan)

2 results

GO Term Analysis Type e-value
DNA repair PANTHER biological process 2.0E-59
Smc5-Smc6 complex PANTHER cellular component 2.0E-59