Login
Help

GENE CARD

Submit your Data

  1. Gene 'Phmamm.CG.MTP2014.S1...'

Gene Card

Best human hits

RNASEK; RNASEK-C17orf49

Species

P.mammillata

Unique Gene ID

Phmamm.g00004364

Gene Model ID

Phmamm.CG.MTP2014.S156.g04364

Location

S156:41144..42310

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S156.g04364.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

1 result

IPR Term Analysis Definition
RNase_K PANTHER Ribonuclease kappa

GOSlim

11 results

GO Term Annotation Origin Type
DNA binding Blast molecular function
nucleoplasm Blast cellular component
cytosol Blast cellular component
membrane Orthology cellular component
integral component of membrane Orthology cellular component
hydrolase activity Orthology molecular function
RNA metabolic process Orthology biological process
intracellular non-membrane-bounded organelle Blast cellular component
nuclear lumen Blast cellular component
macromolecular complex Blast cellular component
nucleoplasm part Blast cellular component

GO (Orthology)

8 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nuclease activity Hs molecular function
endonuclease activity Hs molecular function
endoribonuclease activity Hs molecular function
membrane Hs cellular component
integral component of membrane Hs cellular component
hydrolase activity Hs molecular function
nucleic acid phosphodiester bond hydrolysis Hs biological process
RNA phosphodiester bond hydrolysis, endonucleolytic Hs biological process

GO (Blast)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
DNA binding Hs molecular function 44.7 1.11e-06
nuclease activity Hs molecular function 73.9 2.50e-18
endonuclease activity Hs molecular function 73.9 2.50e-18
endoribonuclease activity Hs molecular function 73.9 2.50e-18
nucleoplasm Hs cellular component 44.7 1.11e-06
cytosol Hs cellular component 44.7 1.11e-06
membrane Hs cellular component 73.9 2.50e-18
integral component of membrane Hs cellular component 73.9 2.50e-18
NURF complex Hs cellular component 44.7 1.11e-06
hydrolase activity Hs molecular function 73.9 2.50e-18
MLL1 complex Hs cellular component 44.7 1.11e-06

GO (InterProScan)

2 results

GO Term Analysis Type e-value
endoribonuclease activity PANTHER molecular function 1.9E-26
nucleic acid phosphodiester bond hydrolysis PANTHER biological process 1.9E-26