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GENE CARD

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Gene Card

Best human hits

SALL1; SALL3

Species

P.mammillata

Unique Gene ID

Phmamm.g00004335

Gene Model ID

Phmamm.CG.MTP2014.S154.g04335

Location

S154:202775..207651

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S154.g04335.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

46 results

AHC0AAA1YC08

Plate: Plate_1_C08

AHC0AAA1YI06

Plate: Plate_1_I06

AHC0AAA12YE11

Plate: Plate_12_E11

AHC0AAA12YO23

Plate: Plate_12_O23

AHC0AAA14YM21

Plate: Plate_14_M21

AHC0AAA18YE10

Plate: Plate_18_E10

AHC0AAA19YP14

Plate: Plate_19_P14

AHC0AAA20YM18

Plate: Plate_20_M18

AHC0AAA3YD22

Plate: Plate_3_D22

AHC0AAA6YP20

Plate: Plate_6_P20

AHC0AAA9YA17

Plate: Plate_9_A17

AHC0AAA31YI11

Plate: Plate_31_I11

AHC0AAA54YA06

Plate: Plate_54_A06

AHC0AAA63YK13

Plate: Plate_63_K13

AHC0AAA113YM16

Plate: Plate_113_M16

AHC0AAA116YA01

Plate: Plate_116_A01

AHC0AAA116YC07

Plate: Plate_116_C07

AHC0AAA121YA02

Plate: Plate_121_A02

AHC0AAA121YK01

Plate: Plate_121_K01

AHC0AAA129YM12

Plate: Plate_129_M12

AHC0AAA134YL03

Plate: Plate_134_L03

AHC0AAA136YF24

Plate: Plate_136_F24

AHC0AAA140YL20

Plate: Plate_140_L20

AHC0AAA143YL19

Plate: Plate_143_L19

AHC0AAA154YF11

Plate: Plate_154_F11

AHC0AAA85YB06

Plate: Plate_85_B06

AHC0AAA92YG13

Plate: Plate_92_G13

AHC0AAA165YC17

Plate: Plate_165_C17

AHC0AAA175YE22

Plate: Plate_175_E22

AHC0AAA179YN10

Plate: Plate_179_N10

AHC0AAA181YJ07

Plate: Plate_181_J07

AHC0AAA182YI06

Plate: Plate_182_I06

AHC0AAA190YG21

Plate: Plate_190_G21

AHC0AAA190YL23

Plate: Plate_190_L23

AHC0AAA196YH13

Plate: Plate_196_H13

AHC0AAA213YH14

Plate: Plate_213_H14

AHC0AAA217YO16

Plate: Plate_217_O16

AHC0AAA219YA23

Plate: Plate_219_A23

AHC0AAA224YC02

Plate: Plate_224_C02

AHC0AAA226YO17

Plate: Plate_226_O17

AHC0AAA227YI16

Plate: Plate_227_I16

AHC0AAA232YH17

Plate: Plate_232_H17

AHC0AAA243YN06

Plate: Plate_243_N06

AHC0AAA256YC06

Plate: Plate_256_C06

AHC0AAA54YC08

Plate: Plate_54_C08

AHC0AAA92YI15

Plate: Plate_92_I15

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Znf_C2H2_type Pfam Zinc finger C2H2-type
Znf_C2H2_sf SUPERFAMILY Zinc finger C2H2 superfamily
Znf_C2H2_type ProSiteProfiles Zinc finger C2H2-type
Znf_C2H2_type ProSitePatterns Zinc finger C2H2-type
Znf_C2H2_type SMART Zinc finger C2H2-type

GOSlim

45 results

GO Term Annotation Origin Type
negative regulation of transcription from RNA polymerase II promoter Orthology biological process
RNA polymerase II core promoter proximal region sequence-specific DNA binding Orthology molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Orthology molecular function
nucleic acid binding Orthology molecular function
DNA binding Orthology molecular function
transcription factor activity, sequence-specific DNA binding Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
transcription from RNA polymerase II promoter Orthology biological process
signal transduction Orthology biological process
heart development Orthology biological process
neurogenesis Orthology biological process
positive regulation of Wnt signaling pathway Orthology biological process
sequence-specific DNA binding Orthology molecular function
transcription regulatory region DNA binding Orthology molecular function
negative regulation of transcription, DNA-templated Orthology biological process
positive regulation of transcription, DNA-templated Orthology biological process
positive regulation of transcription from RNA polymerase II promoter Orthology biological process
metal ion binding Orthology molecular function
RNA polymerase II regulatory region sequence-specific DNA binding Orthology molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Orthology molecular function
transcription factor binding Orthology molecular function
intracellular membrane-bounded organelle Orthology cellular component
intracellular organelle part Orthology cellular component
intracellular non-membrane-bounded organelle Orthology cellular component
animal organ development Orthology biological process
anatomical structure morphogenesis Orthology biological process
organelle organization Orthology biological process
hydrolase activity Orthology molecular function
cellular protein modification process Orthology biological process
reproductive process Orthology biological process
nucleoplasm part Orthology cellular component
macromolecular complex Orthology cellular component
nervous system development Orthology biological process
brain development Orthology biological process
developmental process Orthology biological process
cell surface receptor signaling pathway Orthology biological process
negative regulation of signal transduction Orthology biological process
multicellular organism development Orthology biological process
anatomical structure formation involved in morphogenesis Orthology biological process
anatomical structure development Orthology biological process

GO (Orthology)

51 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
heterochromatin Hs cellular component
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function
ureteric bud development Hs biological process
branching involved in ureteric bud morphogenesis Hs biological process
kidney development Hs biological process
nucleic acid binding Hs molecular function
DNA binding Hs molecular function
transcription factor activity, sequence-specific DNA binding Hs molecular function
histone deacetylase activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
transcription from RNA polymerase II promoter Hs biological process
signal transduction Hs biological process
heart development Hs biological process
beta-catenin binding Hs molecular function
gonad development Hs biological process
chromocenter Hs cellular component
histone deacetylation Hs biological process
NuRD complex Hs cellular component
olfactory nerve development Hs biological process
pituitary gland development Hs biological process
neurogenesis Hs biological process
positive regulation of Wnt signaling pathway Hs biological process
adrenal gland development Hs biological process
somatic stem cell population maintenance Hs biological process
sequence-specific DNA binding Hs molecular function
transcription regulatory region DNA binding Hs molecular function
negative regulation of smoothened signaling pathway Hs biological process
negative regulation of transcription, DNA-templated Hs biological process
positive regulation of transcription, DNA-templated Hs biological process
positive regulation of transcription from RNA polymerase II promoter Hs biological process
metal ion binding Hs molecular function
embryonic digestive tract development Hs biological process
limb development Hs biological process
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function
eye development Hs biological process
neural tube closure Hs biological process
transcription factor binding Hs molecular function
tissue development Hs biological process
stem cell population maintenance Hs biological process
neural tube development Hs biological process
embryonic limb morphogenesis Hs biological process
intracellular membrane-bounded organelle Hs cellular component

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
heterochromatin Hs cellular component 91.7 1.13e-18
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 91.7 1.13e-18
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 91.7 1.13e-18
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 91.7 1.13e-18
nucleic acid binding Hs molecular function 91.7 1.13e-18
DNA binding Hs molecular function 91.7 1.13e-18
transcription factor activity, sequence-specific DNA binding Hs molecular function 91.7 1.13e-18
histone deacetylase activity Hs molecular function 91.7 1.13e-18
protein binding Hs molecular function 91.7 1.13e-18
nucleus Hs cellular component 91.7 1.13e-18
nucleoplasm Hs cellular component 91.7 1.13e-18
cytoplasm Hs cellular component 91.7 1.13e-18
beta-catenin binding Hs molecular function 91.7 1.13e-18
chromocenter Hs cellular component 91.7 1.13e-18
NuRD complex Hs cellular component 91.7 1.13e-18
sequence-specific DNA binding Hs molecular function 91.7 1.13e-18
transcription regulatory region DNA binding Hs molecular function 91.7 1.13e-18
metal ion binding Hs molecular function 91.7 1.13e-18

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding Pfam molecular function 3.1E-4