Aniseed - Gene card

Gene Card

Best human hits

MKRN1; MKRN2; MKRN3

Species

P.mammillata

Unique Gene ID

Phmamm.g00004291

Gene Model ID

Phmamm.CG.MTP2014.S152.g04291

Location

S152:117444..126410

Transcript Models and Sequences

Phmamm.CG.MTP2014.S152.g04291.01.t
Phmamm.CG.MTP2014.S152.g04291.02.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

28 results

AHC0AAA269YA18

Plate: Plate_269_A18

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
Znf_CCCH	ProSiteProfiles	Zinc finger, CCCH-type
Znf_CCCH_sf	SUPERFAMILY	Zinc finger, CCCH-type superfamily
Znf_C3HC4_RING-type	Pfam	Zinc finger, C3HC4 RING-type
Znf_RING/FYVE/PHD	Gene3D	Zinc finger, RING/FYVE/PHD-type
Znf_RING_CS	ProSitePatterns	Zinc finger, RING-type, conserved site
Znf_RING	ProSiteProfiles	Zinc finger, RING-type
Znf_CCCH	SMART	Zinc finger, CCCH-type
Znf_RING	SMART	Zinc finger, RING-type

GOSlim

11 results

GO Term	Annotation Origin	Type
protein polyubiquitination	Orthology	biological process
RNA binding	Orthology	molecular function
ubiquitin-protein transferase activity	Orthology	molecular function
protein binding	Orthology	molecular function
intracellular	Orthology	cellular component
cytosol	Orthology	cellular component
protein ubiquitination	Orthology	biological process
transferase activity	Orthology	molecular function
identical protein binding	Orthology	molecular function
metal ion binding	Orthology	molecular function
intracellular signal transduction	Orthology	biological process

GO (Orthology)

13 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
protein polyubiquitination	Hs	biological process
RNA binding	Hs	molecular function
ubiquitin-protein transferase activity	Hs	molecular function
protein binding	Hs	molecular function
intracellular	Hs	cellular component
cytosol	Hs	cellular component
protein ubiquitination	Hs	biological process
transferase activity	Hs	molecular function
intracellular ribonucleoprotein complex	Hs	cellular component
identical protein binding	Hs	molecular function
protein kinase B signaling	Hs	biological process
metal ion binding	Hs	molecular function
ubiquitin protein ligase activity	Hs	molecular function

GO (Blast)

10 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA binding	Hs	molecular function	372	6.30e-126
ubiquitin-protein transferase activity	Hs	molecular function	372	6.30e-126
protein binding	Hs	molecular function	372	6.30e-126
intracellular	Hs	cellular component	288	4.79e-94
cytosol	Hs	cellular component	372	6.30e-126
transferase activity	Hs	molecular function	372	6.30e-126
intracellular ribonucleoprotein complex	Hs	cellular component	281	2.27e-90
identical protein binding	Hs	molecular function	281	2.27e-90
metal ion binding	Hs	molecular function	372	6.30e-126
ubiquitin protein ligase activity	Hs	molecular function	372	6.30e-126

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
metal ion binding	SUPERFAMILY	molecular function	6.93E-7