Login
Help

GENE CARD

Submit your Data

  1. Gene 'Phmamm.CG.MTP2014.S1...'

Gene Card

Best human hits

TAF3; TAF8

Species

P.mammillata

Unique Gene ID

Phmamm.g00000652

Gene Model ID

Phmamm.CG.MTP2014.S15.g00652

Location

S15:270819..275077

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S15.g00652.01.t
Phmamm.CG.MTP2014.S15.g00652.02.t
Phmamm.CG.MTP2014.S15.g00652.03.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

8 results

AHC0AAA18YJ14

Plate: Plate_18_J14

AHC0AAA129YJ08

Plate: Plate_129_J08

AHC0AAA147YN14

Plate: Plate_147_N14

AHC0AAA86YJ07

Plate: Plate_86_J07

AHC0AAA147YP16

Plate: Plate_147_P16

AHC0AAA175YP01

Plate: Plate_175_P01

AHC0AAA203YH08

Plate: Plate_203_H08

AHC0AAA226YE11

Plate: Plate_226_E11

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree
 Click here to see the tree inference method

Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
BTP Pfam Bromodomain associated domain
TFIID_su8_C CDD Transcription factor TFIID, subunit 8, C-terminal
BTP SMART Bromodomain associated domain
Histone-fold Gene3D Histone-fold
Histone-fold SUPERFAMILY Histone-fold
TFIID_su8_C Pfam Transcription factor TFIID, subunit 8, C-terminal

GOSlim

18 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
transcription from RNA polymerase II promoter Orthology biological process
multicellular organism development Orthology biological process
cell differentiation Orthology biological process
nuclear membrane Blast cellular component
positive regulation of transcription, DNA-templated Orthology biological process
metal ion binding Blast molecular function
protein heterodimerization activity Orthology molecular function
perinuclear region of cytoplasm Orthology cellular component
nucleoplasm part Orthology cellular component
macromolecular complex Orthology cellular component
cellular process Orthology biological process
protein localization to organelle Orthology biological process

GO (Orthology)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
transcription factor TFIID complex Hs cellular component
cytoplasm Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
multicellular organism development Hs biological process
cell differentiation Hs biological process
snRNA transcription from RNA polymerase II promoter Hs biological process
positive regulation of transcription, DNA-templated Hs biological process
protein heterodimerization activity Hs molecular function
perinuclear region of cytoplasm Hs cellular component
maintenance of protein location in nucleus Hs biological process

GO (Blast)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
p53 binding Hs molecular function 44.7 3.41e-05
protein binding Hs molecular function 200 7.44e-63
nucleus Hs cellular component 200 7.44e-63
nucleoplasm Hs cellular component 200 7.44e-63
transcription factor TFIID complex Hs cellular component 200 7.44e-63
cytoplasm Hs cellular component 200 7.44e-63
nuclear membrane Hs cellular component 44.7 3.41e-05
metal ion binding Hs molecular function 44.7 3.41e-05
protein heterodimerization activity Hs molecular function 200 7.44e-63
perinuclear region of cytoplasm Hs cellular component 200 7.44e-63

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein heterodimerization activity Gene3D molecular function 2.2E-22

Back to Top