Gene Card
Best human hits
RRP7A
Species
Unique Gene ID
Phmamm.g00004206
Gene Model ID
Phmamm.CG.MTP2014.S148.g04206
Location
S148:35909..38148
Transcript Models and Sequences
Genoscope Yasuo Villefranche
1 result
AHC0AAA131YH14
Plate: Plate_131_H14
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
7 results
| IPR Term | Analysis | Definition |
|---|---|---|
| RBD_domain_sf | SUPERFAMILY | RNA-binding domain superfamily |
| RRM_dom | ProSiteProfiles | RNA recognition motif domain |
| RRM_dom | SMART | RNA recognition motif domain |
| Rrp7A_RRM | CDD | Rrp7A, RNA recognition motif |
| RRM_dom | Pfam | RNA recognition motif domain |
| Nucleotide-bd_a/b_plait_sf | Gene3D | Nucleotide-binding alpha-beta plait domain superfamily |
| RRP7 | Pfam | Ribosomal RNA-processing protein 7 |
GOSlim
9 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| nucleic acid binding | Orthology | molecular function |
| RNA binding | Orthology | molecular function |
| protein binding | Orthology | molecular function |
| nucleoplasm | Orthology | cellular component |
| cytoplasm | Orthology | cellular component |
| RNA processing | Orthology | biological process |
| nuclear part | Orthology | cellular component |
| macromolecular complex | Orthology | cellular component |
| nucleolus | Orthology | cellular component |
GO (Orthology)
9 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| ribosomal small subunit assembly | Hs | biological process |
| nucleic acid binding | Hs | molecular function |
| RNA binding | Hs | molecular function |
| protein binding | Hs | molecular function |
| nucleoplasm | Hs | cellular component |
| cytoplasm | Hs | cellular component |
| rRNA processing | Hs | biological process |
| CURI complex | Hs | cellular component |
| UTP-C complex | Hs | cellular component |
GO (Blast)
7 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| nucleic acid binding | Hs | molecular function | 184 | 1.34e-57 |
| RNA binding | Hs | molecular function | 184 | 1.34e-57 |
| protein binding | Hs | molecular function | 184 | 1.34e-57 |
| nucleoplasm | Hs | cellular component | 184 | 1.34e-57 |
| cytoplasm | Hs | cellular component | 184 | 1.34e-57 |
| CURI complex | Hs | cellular component | 184 | 1.34e-57 |
| UTP-C complex | Hs | cellular component | 184 | 1.34e-57 |
GO (InterProScan)
1 result
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| nucleic acid binding | SUPERFAMILY | molecular function | 1.48E-10 |
