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GENE CARD

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Gene Card

Best human hits

DLL1; NOTCH2; SNED1

Species

P.mammillata

Unique Gene ID

Phmamm.g00004158

Gene Model ID

Phmamm.CG.MTP2014.S146.g04158

Location

S146:31943..37858

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S146.g04158.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

11 results

AHC0AAA32YG23

Plate: Plate_32_G23

AHC0AAA35YF18

Plate: Plate_35_F18

AHC0AAA75YG14

Plate: Plate_75_G14

AHC0AAA80YJ19

Plate: Plate_80_J19

AHC0AAA101YJ20

Plate: Plate_101_J20

AHC0AAA112YA03

Plate: Plate_112_A03

AHC0AAA95YG06

Plate: Plate_95_G06

AHC0AAA171YM24

Plate: Plate_171_M24

AHC0AAA190YI22

Plate: Plate_190_I22

AHC0AAA218YI13

Plate: Plate_218_I13

AHC0AAA258YA08

Plate: Plate_258_A08

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
ZP_dom ProSiteProfiles Zona pellucida domain
EGF-like_CS ProSitePatterns EGF-like, conserved site
EGF-like_dom SMART EGF-like domain
EGF-like_dom ProSiteProfiles EGF-like domain

GOSlim

22 results

GO Term Annotation Origin Type
Golgi membrane Blast cellular component
calcium ion binding Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
endoplasmic reticulum membrane Blast cellular component
plasma membrane Blast cellular component
integral component of plasma membrane Blast cellular component
adherens junction Blast cellular component
cell surface Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
apical plasma membrane Blast cellular component
cell junction Blast cellular component
cytoplasmic vesicle Blast cellular component
membrane raft Blast cellular component
extracellular exosome Blast cellular component
receptor binding Blast molecular function
transcription factor binding Blast molecular function
macromolecular complex Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

25 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Golgi membrane Hs cellular component 47.8 1.39e-05
receptor activity Hs molecular function 47.8 1.39e-05
Notch binding Hs molecular function 46.2 4.25e-05
calcium ion binding Hs molecular function 48.1 1.01e-05
protein binding Hs molecular function 48.1 1.01e-05
extracellular region Hs cellular component 48.1 1.01e-05
nucleus Hs cellular component 47.8 1.39e-05
nucleoplasm Hs cellular component 47.8 1.39e-05
cytoplasm Hs cellular component 47.8 1.39e-05
endoplasmic reticulum membrane Hs cellular component 47.8 1.39e-05
plasma membrane Hs cellular component 47.8 1.39e-05
integral component of plasma membrane Hs cellular component 47.8 1.39e-05
adherens junction Hs cellular component 46.2 4.25e-05
cell surface Hs cellular component 47.8 1.39e-05
membrane Hs cellular component 47.8 1.39e-05
integral component of membrane Hs cellular component 47.8 1.39e-05
apical plasma membrane Hs cellular component 46.2 4.25e-05
cell junction Hs cellular component 46.2 4.25e-05
Tat protein binding Hs molecular function 46.2 4.25e-05
cytoplasmic vesicle Hs cellular component 46.2 4.25e-05
transcription factor activity, ligand-activated RNA polymerase II transcription factor binding Hs molecular function 47.8 1.39e-05
receptor complex Hs cellular component 47.8 1.39e-05
membrane raft Hs cellular component 46.2 4.25e-05
extracellular exosome Hs cellular component 48.1 1.01e-05
scaffold protein binding Hs molecular function 46.2 4.25e-05

GO (InterProScan)

No result

GO Term Analysis Type e-value