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Gene Card

Best human hits

ARHGAP1; ARHGAP8; PRR5-ARHGAP8

Species

P.mammillata

Unique Gene ID

Phmamm.g00014601

Gene Model ID

Phmamm.CG.MTP2014.S1361.g14601

Location

S1361:23606..36018

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S1361.g14601.01.t
Phmamm.CG.MTP2014.S1361.g14601.02.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

10 results

AHC0AAA6YN01

Plate: Plate_6_N01

AHC0AAA72YB20

Plate: Plate_72_B20

AHC0AAA80YB02

Plate: Plate_80_B02

AHC0AAA104YK03

Plate: Plate_104_K03

AHC0AAA140YH19

Plate: Plate_140_H19

AHC0AAA159YN08

Plate: Plate_159_N08

AHC0AAA167YK16

Plate: Plate_167_K16

AHC0AAA175YD01

Plate: Plate_175_D01

AHC0AAA230YJ14

Plate: Plate_230_J14

AHC0AAA235YG24

Plate: Plate_235_G24

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

11 results

IPR Term Analysis Definition
RhoGAP_dom SMART Rho GTPase-activating protein domain
CRAL-TRIO_dom ProSiteProfiles CRAL-TRIO lipid binding domain
RhoGAP_dom ProSiteProfiles Rho GTPase-activating protein domain
CRAL-TRIO_dom Pfam CRAL-TRIO lipid binding domain
CRAL-TRIO_dom_sf SUPERFAMILY CRAL-TRIO lipid binding domain superfamily
RhoGAP_dom Pfam Rho GTPase-activating protein domain
CRAL-TRIO_dom_sf Gene3D CRAL-TRIO lipid binding domain superfamily
CRAL-TRIO_dom SMART CRAL-TRIO lipid binding domain
Rho_GTPase_activation_prot Gene3D Rho GTPase activation protein
CRAL-TRIO_dom CDD CRAL-TRIO lipid binding domain
Rho_GTPase_activation_prot SUPERFAMILY Rho GTPase activation protein

GOSlim

26 results

GO Term Annotation Origin Type
GTPase activator activity Orthology molecular function
protein binding Orthology molecular function
cytoplasm Orthology cellular component
cytosol Orthology cellular component
signal transduction Orthology biological process
small GTPase mediated signal transduction Orthology biological process
positive regulation of signal transduction Orthology biological process
membrane Orthology cellular component
integral component of membrane Orthology cellular component
regulation of GTPase activity Orthology biological process
positive regulation of GTPase activity Orthology biological process
perinuclear region of cytoplasm Orthology cellular component
extracellular exosome Orthology cellular component
intracellular organelle part Orthology cellular component
whole membrane Orthology cellular component
endosome Orthology cellular component
bounding membrane of organelle Orthology cellular component
intracellular transport Orthology biological process
enzyme binding Orthology molecular function
protein transport Orthology biological process
metal ion transport Orthology biological process
cell adhesion molecule binding Orthology molecular function
regulation of signal transduction Orthology biological process
intracellular signal transduction Orthology biological process
protein phosphorylation Orthology biological process
transmembrane transport Orthology biological process

GO (Orthology)

26 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
SH3/SH2 adaptor activity Hs molecular function
GTPase activator activity Hs molecular function
protein binding Hs molecular function
cytoplasm Hs cellular component
cytosol Hs cellular component
signal transduction Hs biological process
small GTPase mediated signal transduction Hs biological process
Rho protein signal transduction Hs biological process
positive regulation of signal transduction Hs biological process
endosome membrane Hs cellular component
membrane Hs cellular component
integral component of membrane Hs cellular component
endosomal transport Hs biological process
SH3 domain binding Hs molecular function
Rab GTPase binding Hs molecular function
transferrin transport Hs biological process
regulation of GTPase activity Hs biological process
positive regulation of GTPase activity Hs biological process
cadherin binding Hs molecular function
perinuclear region of cytoplasm Hs cellular component
regulation of small GTPase mediated signal transduction Hs biological process
extracellular exosome Hs cellular component
positive regulation of ERK1 and ERK2 cascade Hs biological process
sorting endosome Hs cellular component
ferric iron import across plasma membrane Hs biological process
negative regulation of endocytic recycling Hs biological process

GO (Blast)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
SH3/SH2 adaptor activity Hs molecular function 398 1.17e-135
GTPase activator activity Hs molecular function 398 1.17e-135
protein binding Hs molecular function 398 1.17e-135
cytoplasm Hs cellular component 398 1.17e-135
cytosol Hs cellular component 398 1.17e-135
endosome membrane Hs cellular component 398 1.17e-135
membrane Hs cellular component 398 1.17e-135
integral component of membrane Hs cellular component 398 1.17e-135
SH3 domain binding Hs molecular function 398 1.17e-135
Rab GTPase binding Hs molecular function 398 1.17e-135
cadherin binding Hs molecular function 398 1.17e-135
perinuclear region of cytoplasm Hs cellular component 398 1.17e-135
extracellular exosome Hs cellular component 398 1.17e-135
sorting endosome Hs cellular component 398 1.17e-135

GO (InterProScan)

1 result

GO Term Analysis Type e-value
signal transduction Gene3D biological process 8.0E-59

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