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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S1...'

Gene Card

Best human hits

ZNF724; ZNF85

Species

P.mammillata

Unique Gene ID

Phmamm.g00014375

Gene Model ID

Phmamm.CG.MTP2014.S1287.g14375

Location

S1287:36118..42729

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S1287.g14375.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

10 results

AHC0AAA8YH02

Plate: Plate_8_H02

AHC0AAA40YN02

Plate: Plate_40_N02

AHC0AAA57YN14

Plate: Plate_57_N14

AHC0AAA126YL10

Plate: Plate_126_L10

AHC0AAA147YD16

Plate: Plate_147_D16

AHC0AAA147YM10

Plate: Plate_147_M10

AHC0AAA147YD14

Plate: Plate_147_D14

AHC0AAA147YO12

Plate: Plate_147_O12

AHC0AAA262YE18

Plate: Plate_262_E18

AHC0AAA265YC20

Plate: Plate_265_C20

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Znf_C2H2_type ProSitePatterns Zinc finger C2H2-type
Znf_C2H2_type ProSiteProfiles Zinc finger C2H2-type
Znf_C2H2_type SMART Zinc finger C2H2-type
Znf_C2H2_sf SUPERFAMILY Zinc finger C2H2 superfamily
Znf_C2H2_type Pfam Zinc finger C2H2-type

GOSlim

7 results

GO Term Annotation Origin Type
nucleic acid binding Blast molecular function
DNA binding Blast molecular function
transcription factor activity, sequence-specific DNA binding Blast molecular function
transcription corepressor activity Blast molecular function
intracellular Blast cellular component
nucleus Blast cellular component
metal ion binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

7 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleic acid binding Hs molecular function 206 6.14e-63
DNA binding Hs molecular function 206 6.14e-63
transcription factor activity, sequence-specific DNA binding Hs molecular function 196 3.47e-59
transcription corepressor activity Hs molecular function 196 3.47e-59
intracellular Hs cellular component 206 6.14e-63
nucleus Hs cellular component 206 6.14e-63
metal ion binding Hs molecular function 206 6.14e-63

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding Pfam molecular function 5.7E-5