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GENE CARD

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Gene Card

Best human hits

RNF13; RNF167; ZNRF4

Species

P.mammillata

Unique Gene ID

Phmamm.g00003685

Gene Model ID

Phmamm.CG.MTP2014.S123.g03685

Location

S123:82969..88534

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

14 results

AHC0AAA19YH23

Plate: Plate_19_H23

AHC0AAA42YO19

Plate: Plate_42_O19

AHC0AAA57YK09

Plate: Plate_57_K09

AHC0AAA71YK10

Plate: Plate_71_K10

AHC0AAA80YI10

Plate: Plate_80_I10

AHC0AAA100YF13

Plate: Plate_100_F13

AHC0AAA104YB08

Plate: Plate_104_B08

AHC0AAA107YH18

Plate: Plate_107_H18

AHC0AAA137YC18

Plate: Plate_137_C18

AHC0AAA148YL18

Plate: Plate_148_L18

AHC0AAA96YP04

Plate: Plate_96_P04

AHC0AAA174YO18

Plate: Plate_174_O18

AHC0AAA239YL15

Plate: Plate_239_L15

AHC0AAA255YC22

Plate: Plate_255_C22

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Znf_RING/FYVE/PHD Gene3D Zinc finger, RING/FYVE/PHD-type
Znf_RING SMART Zinc finger, RING-type
Znf_RING ProSiteProfiles Zinc finger, RING-type
Znf_RING Pfam Zinc finger, RING-type
PA_domain Pfam PA domain

GOSlim

25 results

GO Term Annotation Origin Type
Golgi membrane Blast cellular component
ubiquitin-protein transferase activity Blast molecular function
protein binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
lysosome Blast cellular component
lysosomal membrane Blast cellular component
endosome Blast cellular component
endoplasmic reticulum Blast cellular component
endoplasmic reticulum membrane Blast cellular component
Golgi apparatus Blast cellular component
cytosol Blast cellular component
zinc ion binding Blast molecular function
endomembrane system Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
transferase activity Blast molecular function
intracellular membrane-bounded organelle Blast cellular component
metal ion binding Blast molecular function
organelle inner membrane Blast cellular component
nuclear membrane Blast cellular component
intracellular organelle part Blast cellular component
whole membrane Blast cellular component
bounding membrane of organelle Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Golgi membrane Hs cellular component 244 1.86e-77
ubiquitin-protein transferase activity Hs molecular function 244 1.86e-77
protein binding Hs molecular function 244 1.86e-77
nucleus Hs cellular component 244 1.86e-77
nuclear inner membrane Hs cellular component 244 1.86e-77
nucleoplasm Hs cellular component 244 1.86e-77
cytoplasm Hs cellular component 204 5.48e-62
lysosome Hs cellular component 244 1.86e-77
lysosomal membrane Hs cellular component 244 1.86e-77
endosome Hs cellular component 244 1.86e-77
endoplasmic reticulum Hs cellular component 244 1.86e-77
endoplasmic reticulum membrane Hs cellular component 244 1.86e-77
Golgi apparatus Hs cellular component 244 1.86e-77
cytosol Hs cellular component 244 1.86e-77
zinc ion binding Hs molecular function 204 5.48e-62
endomembrane system Hs cellular component 204 5.48e-62
membrane Hs cellular component 244 1.86e-77
integral component of membrane Hs cellular component 244 1.86e-77
transferase activity Hs molecular function 244 1.86e-77
late endosome membrane Hs cellular component 244 1.86e-77
intracellular membrane-bounded organelle Hs cellular component 244 1.86e-77
metal ion binding Hs molecular function 244 1.86e-77
ubiquitin protein ligase activity Hs molecular function 244 1.86e-77

GO (InterProScan)

No result

GO Term Analysis Type e-value