Aniseed - Gene card

Gene 'Phmamm.CG.MTP2014.S1...'

Gene Card

Best human hits

NOC2L

Species

P.mammillata

Unique Gene ID

Phmamm.g00013937

Gene Model ID

Phmamm.CG.MTP2014.S1164.g13937

Location

S1164:4193..12900

Transcript Models and Sequences

Phmamm.CG.MTP2014.S1164.g13937.01.t
Phmamm.CG.MTP2014.S1164.g13937.02.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

1 result

AHC0AAA15YA07

Plate: Plate_15_A07

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
ARM-type_fold	SUPERFAMILY	Armadillo-type fold
Noc2	Pfam	Nucleolar complex protein 2
Noc2	PANTHER	Nucleolar complex protein 2

GOSlim

23 results

GO Term	Annotation Origin	Type
negative regulation of transcription from RNA polymerase II promoter	Orthology	biological process
chromatin binding	Orthology	molecular function
transcription corepressor activity	Orthology	molecular function
RNA binding	Orthology	molecular function
binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
nucleolus	Orthology	cellular component
cytosol	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
apoptotic process	Orthology	biological process
macromolecular complex	Orthology	cellular component
nuclear part	Orthology	cellular component
macromolecular complex binding	Orthology	molecular function
organelle organization	Orthology	biological process
DNA binding	Orthology	molecular function
cellular protein modification process	Orthology	biological process
transcription factor binding	Orthology	molecular function
intracellular signal transduction	Orthology	biological process
negative regulation of signal transduction	Orthology	biological process
negative regulation of apoptotic process	Orthology	biological process

GO (Orthology)

23 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
chromatin binding	Hs	molecular function
transcription corepressor activity	Hs	molecular function
RNA binding	Hs	molecular function
binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
nucleolus	Hs	cellular component
cytosol	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
apoptotic process	Hs	biological process
Noc1p-Noc2p complex	Hs	cellular component
Noc2p-Noc3p complex	Hs	cellular component
nucleosome binding	Hs	molecular function
chromatin assembly	Hs	biological process
cellular response to UV	Hs	biological process
negative regulation of histone acetylation	Hs	biological process
ribosomal large subunit biogenesis	Hs	biological process
histone binding	Hs	molecular function
repressing transcription factor binding	Hs	molecular function
negative regulation of intrinsic apoptotic signaling pathway	Hs	biological process

GO (Blast)

14 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
chromatin binding	Hs	molecular function	346	5.91e-108
transcription corepressor activity	Hs	molecular function	346	5.91e-108
RNA binding	Hs	molecular function	346	5.91e-108
binding	Hs	molecular function	346	5.91e-108
protein binding	Hs	molecular function	346	5.91e-108
nucleus	Hs	cellular component	346	5.91e-108
nucleoplasm	Hs	cellular component	346	5.91e-108
nucleolus	Hs	cellular component	346	5.91e-108
cytosol	Hs	cellular component	346	5.91e-108
Noc1p-Noc2p complex	Hs	cellular component	346	5.91e-108
Noc2p-Noc3p complex	Hs	cellular component	346	5.91e-108
nucleosome binding	Hs	molecular function	346	5.91e-108
histone binding	Hs	molecular function	346	5.91e-108
repressing transcription factor binding	Hs	molecular function	346	5.91e-108

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
binding	SUPERFAMILY	molecular function	2.67E-11