Aniseed - Gene card

Gene Card

Best human hits

CREBBP; EP300; UBR5

Species

P.mammillata

Unique Gene ID

Phmamm.g00003536

Gene Model ID

Phmamm.CG.MTP2014.S116.g03536

Location

S116:145208..165317

Transcript Models and Sequences

Phmamm.CG.MTP2014.S116.g03536.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

2 results

AHC0AAA45YO24

Plate: Plate_45_O24

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
KIX_dom	ProSiteProfiles	Coactivator CBP, KIX domain
E3_UbLigase_EDD_UBA	CDD	E3 ubiquitin ligase EDD, ubiquitin-associated domain
KIX_dom	Pfam	Coactivator CBP, KIX domain
KIX_dom_sf	SUPERFAMILY	Coactivator CBP, KIX domain superfamily
E3_UbLigase_EDD_UBA	Pfam	E3 ubiquitin ligase EDD, ubiquitin-associated domain

GOSlim

45 results

GO Term	Annotation Origin	Type
protein polyubiquitination	Orthology	biological process
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Blast	molecular function
core promoter proximal region sequence-specific DNA binding	Blast	molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Blast	molecular function
DNA binding	Blast	molecular function
chromatin binding	Blast	molecular function
transcription factor activity, sequence-specific DNA binding	Blast	molecular function
transcription cofactor activity	Blast	molecular function
transcription coactivator activity	Blast	molecular function
RNA binding	Orthology	molecular function
ubiquitin-protein transferase activity	Orthology	molecular function
signal transducer activity	Blast	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Blast	cellular component
cytosol	Orthology	cellular component
DNA repair	Orthology	biological process
regulation of transcription, DNA-templated	InterProScan	biological process
cellular response to DNA damage stimulus	Orthology	biological process
signal transduction	Orthology	biological process
protein C-terminus binding	Blast	molecular function
transcription factor binding	Blast	molecular function
zinc ion binding	Orthology	molecular function
cell proliferation	Orthology	biological process
positive regulation of gene expression	Orthology	biological process
membrane	Orthology	cellular component
protein ubiquitination	Orthology	biological process
nuclear body	Blast	cellular component
transferase activity	Orthology	molecular function
macromolecular complex	Orthology	cellular component
metal ion binding	Orthology	molecular function
perinuclear region of cytoplasm	Orthology	cellular component
positive regulation of canonical Wnt signaling pathway	Orthology	biological process
proteolysis	Orthology	biological process
response to lipid	Orthology	biological process
cellular response to organic substance	Orthology	biological process
organelle organization	Orthology	biological process
nucleoplasm part	Blast	cellular component
intracellular non-membrane-bounded organelle	Blast	cellular component
nuclear lumen	Blast	cellular component
transcription regulatory region DNA binding	Blast	molecular function
cellular protein modification process	Blast	biological process
intracellular part	Blast	cellular component
receptor binding	Blast	molecular function

GO (Orthology)

28 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
protein polyubiquitination	Hs	biological process
RNA binding	Hs	molecular function
ubiquitin-protein transferase activity	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
cytosol	Hs	cellular component
DNA repair	Hs	biological process
ubiquitin-dependent protein catabolic process	Hs	biological process
cellular response to DNA damage stimulus	Hs	biological process
zinc ion binding	Hs	molecular function
cell proliferation	Hs	biological process
positive regulation of gene expression	Hs	biological process
membrane	Hs	cellular component
protein ubiquitination	Hs	biological process
transferase activity	Hs	molecular function
macromolecular complex	Hs	cellular component
positive regulation of protein import into nucleus, translocation	Hs	biological process
ubiquitin-ubiquitin ligase activity	Hs	molecular function
ubiquitin binding	Hs	molecular function
metal ion binding	Hs	molecular function
perinuclear region of cytoplasm	Hs	cellular component
progesterone receptor signaling pathway	Hs	biological process
ubiquitin protein ligase activity	Hs	molecular function
protein K48-linked ubiquitination	Hs	biological process
positive regulation of canonical Wnt signaling pathway	Hs	biological process
negative regulation of histone H2A K63-linked ubiquitination	Hs	biological process
negative regulation of double-strand break repair	Hs	biological process

GO (Blast)

59 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
histone acetyltransferase complex	Hs	cellular component	99.4	1.95e-20
nuclear chromatin	Hs	cellular component	99.4	1.95e-20
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	91.3	6.18e-18
core promoter proximal region sequence-specific DNA binding	Hs	molecular function	99.4	1.95e-20
core promoter binding	Hs	molecular function	91.3	6.18e-18
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	99.4	1.95e-20
RNA polymerase II transcription factor binding	Hs	molecular function	99.4	1.95e-20
RNA polymerase II activating transcription factor binding	Hs	molecular function	99.4	1.95e-20
RNA polymerase II transcription coactivator activity	Hs	molecular function	99.4	1.95e-20
transcriptional repressor activity, RNA polymerase II transcription factor binding	Hs	molecular function	99.4	1.95e-20
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	91.3	6.18e-18
p53 binding	Hs	molecular function	99.4	1.95e-20
DNA binding	Hs	molecular function	91.3	6.18e-18
chromatin binding	Hs	molecular function	99.4	1.95e-20
damaged DNA binding	Hs	molecular function	99.4	1.95e-20
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	99.4	1.95e-20
transcription cofactor activity	Hs	molecular function	99.4	1.95e-20
transcription coactivator activity	Hs	molecular function	99.4	1.95e-20
RNA binding	Hs	molecular function	463	6.42e-132
histone acetyltransferase activity	Hs	molecular function	99.4	1.95e-20
lysine N-acetyltransferase activity, acting on acetyl phosphate as donor	Hs	molecular function	91.3	6.18e-18
ubiquitin-protein transferase activity	Hs	molecular function	463	6.42e-132
signal transducer activity	Hs	molecular function	99.4	1.95e-20
protein binding	Hs	molecular function	463	6.42e-132
nucleus	Hs	cellular component	463	6.42e-132
nucleoplasm	Hs	cellular component	463	6.42e-132
transcription factor complex	Hs	cellular component	91.3	6.18e-18
chromosome	Hs	cellular component	91.3	6.18e-18
cytoplasm	Hs	cellular component	99.4	1.95e-20
cytosol	Hs	cellular component	463	6.42e-132
beta-catenin binding	Hs	molecular function	91.3	6.18e-18
protein C-terminus binding	Hs	molecular function	91.3	6.18e-18
transcription factor binding	Hs	molecular function	99.4	1.95e-20
zinc ion binding	Hs	molecular function	463	6.42e-132
membrane	Hs	cellular component	463	6.42e-132
acetyltransferase activity	Hs	molecular function	99.4	1.95e-20
nuclear body	Hs	cellular component	99.4	1.95e-20
transferase activity	Hs	molecular function	463	6.42e-132
transferase activity, transferring acyl groups	Hs	molecular function	99.4	1.95e-20
chromatin DNA binding	Hs	molecular function	91.3	6.18e-18
macromolecular complex	Hs	cellular component	463	6.42e-132
protein-DNA complex	Hs	cellular component	91.3	6.18e-18
activating transcription factor binding	Hs	molecular function	91.3	6.18e-18
peptide N-acetyltransferase activity	Hs	molecular function	99.4	1.95e-20
ubiquitin-ubiquitin ligase activity	Hs	molecular function	463	6.42e-132
nuclear hormone receptor binding	Hs	molecular function	91.3	6.18e-18
ubiquitin binding	Hs	molecular function	463	6.42e-132
MRF binding	Hs	molecular function	99.4	1.95e-20
metal ion binding	Hs	molecular function	463	6.42e-132
perinuclear region of cytoplasm	Hs	cellular component	463	6.42e-132
androgen receptor binding	Hs	molecular function	91.3	6.18e-18
ubiquitin protein ligase activity	Hs	molecular function	463	6.42e-132
peptide-lysine-N-acetyltransferase activity	Hs	molecular function	91.3	6.18e-18
protein propionyltransferase activity	Hs	molecular function	91.3	6.18e-18
pre-mRNA intronic binding	Hs	molecular function	91.3	6.18e-18
STAT family protein binding	Hs	molecular function	91.3	6.18e-18
peptide butyryltransferase activity	Hs	molecular function	91.3	6.18e-18
histone crotonyltransferase activity	Hs	molecular function	91.3	6.18e-18
histone butyryltransferase activity	Hs	molecular function	91.3	6.18e-18

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
transcription cofactor activity	SUPERFAMILY	molecular function	2.22E-23
regulation of transcription, DNA-templated	SUPERFAMILY	biological process	2.22E-23
ubiquitin binding	Pfam	molecular function	5.3E-30