Gene Card
Best human hits
GAR1
Species
Unique Gene ID
Phmamm.g00013715
Gene Model ID
Phmamm.CG.MTP2014.S1111.g13715
Location
S1111:17984..18840
Transcript Models and Sequences
Phmamm.CG.MTP2014.S1111.g13715.01.t
Phmamm.CG.MTP2014.S1111.g13715.02.t
AHC0AAA29YA17
Plate: Plate_29_A17
AHC0AAA29YM04
Plate: Plate_29_M04
AHC0AAA37YP09
Plate: Plate_37_P09
AHC0AAA43YE08
Plate: Plate_43_E08
AHC0AAA49YI03
Plate: Plate_49_I03
AHC0AAA62YH21
Plate: Plate_62_H21
AHC0AAA63YJ21
Plate: Plate_63_J21
AHC0AAA70YC16
Plate: Plate_70_C16
AHC0AAA76YB09
Plate: Plate_76_B09
AHC0AAA104YJ07
Plate: Plate_104_J07
AHC0AAA115YN22
Plate: Plate_115_N22
AHC0AAA138YG15
Plate: Plate_138_G15
AHC0AAA142YP01
Plate: Plate_142_P01
AHC0AAA142YP24
Plate: Plate_142_P24
AHC0AAA90YJ05
Plate: Plate_90_J05
AHC0AAA165YL01
Plate: Plate_165_L01
AHC0AAA167YO13
Plate: Plate_167_O13
AHC0AAA173YB07
Plate: Plate_173_B07
AHC0AAA183YB03
Plate: Plate_183_B03
AHC0AAA192YL03
Plate: Plate_192_L03
AHC0AAA200YN22
Plate: Plate_200_N22
AHC0AAA211YO11
Plate: Plate_211_O11
AHC0AAA215YL15
Plate: Plate_215_L15
AHC0AAA242YD16
Plate: Plate_242_D16
AHC0AAA243YN24
Plate: Plate_243_N24
AHC0AAA244YL23
Plate: Plate_244_L23
AHC0AAA259YN05
Plate: Plate_259_N05
n/a
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IPR Term | Analysis | Definition |
---|---|---|
H/ACA_rnp_Gar1 | ProDom | H/ACA ribonucleoprotein complex, subunit Gar1 |
Gar1/Naf1_Cbf5-bd_sf | Gene3D | H/ACA RNP complex subunit Gar1/Naf1, Cbf5-binding domain |
H/ACA_rnp_Gar1/Naf1 | Pfam | H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 |
Transl_B-barrel_sf | SUPERFAMILY | Translation protein, beta-barrel domain superfamily |
H/ACA_rnp_Gar1 | PANTHER | H/ACA ribonucleoprotein complex, subunit Gar1 |
GO Term | Annotation Origin | Type |
---|---|---|
RNA binding | Orthology | molecular function |
protein binding | Orthology | molecular function |
nucleus | Orthology | cellular component |
nucleoplasm | Orthology | cellular component |
nucleolus | Orthology | cellular component |
RNA processing | Orthology | biological process |
intracellular non-membrane-bounded organelle | Orthology | cellular component |
nuclear lumen | Orthology | cellular component |
RNA metabolic process | Orthology | biological process |
nuclear part | Orthology | cellular component |
macromolecular complex | Orthology | cellular component |
organelle organization | Orthology | biological process |
transferase activity, transferring phosphorus-containing groups | Orthology | molecular function |
DNA metabolic process | Orthology | biological process |
nuclear body | Orthology | cellular component |
GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
---|---|---|
snoRNA guided rRNA pseudouridine synthesis | Hs | biological process |
nuclear chromosome, telomeric region | Hs | cellular component |
pseudouridine synthesis | Hs | biological process |
fibrillar center | Hs | cellular component |
RNA binding | Hs | molecular function |
protein binding | Hs | molecular function |
nucleus | Hs | cellular component |
nucleoplasm | Hs | cellular component |
telomerase holoenzyme complex | Hs | cellular component |
nucleolus | Hs | cellular component |
rRNA processing | Hs | biological process |
telomere maintenance via telomerase | Hs | biological process |
Cajal body | Hs | cellular component |
intracellular ribonucleoprotein complex | Hs | cellular component |
rRNA pseudouridine synthesis | Hs | biological process |
box H/ACA snoRNP complex | Hs | cellular component |
box H/ACA snoRNA binding | Hs | molecular function |
ribosome biogenesis | Hs | biological process |
telomerase RNA binding | Hs | molecular function |
box H/ACA scaRNP complex | Hs | cellular component |
box H/ACA telomerase RNP complex | Hs | cellular component |
GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
---|---|---|---|---|
nuclear chromosome, telomeric region | Hs | cellular component | 153 | 3.00e-47 |
fibrillar center | Hs | cellular component | 153 | 3.00e-47 |
RNA binding | Hs | molecular function | 153 | 3.00e-47 |
protein binding | Hs | molecular function | 153 | 3.00e-47 |
nucleus | Hs | cellular component | 153 | 3.00e-47 |
nucleoplasm | Hs | cellular component | 153 | 3.00e-47 |
telomerase holoenzyme complex | Hs | cellular component | 153 | 3.00e-47 |
nucleolus | Hs | cellular component | 153 | 3.00e-47 |
Cajal body | Hs | cellular component | 153 | 3.00e-47 |
intracellular ribonucleoprotein complex | Hs | cellular component | 153 | 3.00e-47 |
box H/ACA snoRNP complex | Hs | cellular component | 153 | 3.00e-47 |
box H/ACA snoRNA binding | Hs | molecular function | 153 | 3.00e-47 |
telomerase RNA binding | Hs | molecular function | 153 | 3.00e-47 |
box H/ACA scaRNP complex | Hs | cellular component | 153 | 3.00e-47 |
box H/ACA telomerase RNP complex | Hs | cellular component | 153 | 3.00e-47 |
GO Term | Analysis | Type | e-value |
---|---|---|---|
pseudouridine synthesis | PANTHER | biological process | 4.8E-58 |
box H/ACA snoRNP complex | PANTHER | cellular component | 4.8E-58 |
ribosome biogenesis | PANTHER | biological process | 4.8E-58 |