Gene Card
Best human hits
PTPRF; PTPRQ; USH2A
Species
Unique Gene ID
Phmamm.g00013711
Gene Model ID
Phmamm.CG.MTP2014.S1110.g13711
Location
S1110:9398..20676
Transcript Models and Sequences
n/a
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
10 results
| IPR Term | Analysis | Definition |
|---|---|---|
| FN3_dom | ProSiteProfiles | Fibronectin type III |
| FN3_dom | Pfam | Fibronectin type III |
| Ig-like_fold | Gene3D | Immunoglobulin-like fold |
| GPS | SMART | GPS motif |
| FN3_dom | CDD | Fibronectin type III |
| FN3_sf | SUPERFAMILY | Fibronectin type III superfamily |
| GPS | ProSiteProfiles | GPS motif |
| GPS | Pfam | GPS motif |
| FN3_dom | SMART | Fibronectin type III |
| GPCR_2_secretin-like | Pfam | GPCR, family 2, secretin-like |
GOSlim
33 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| protein binding | Blast | molecular function |
| extracellular region | Blast | cellular component |
| cytoplasm | Blast | cellular component |
| plasma membrane | Blast | cellular component |
| integral component of plasma membrane | Blast | cellular component |
| protein dephosphorylation | Blast | biological process |
| membrane | Blast | cellular component |
| integral component of membrane | Blast | cellular component |
| dephosphorylation | Blast | biological process |
| apical plasma membrane | Blast | cellular component |
| hydrolase activity | Blast | molecular function |
| protein homodimerization activity | Blast | molecular function |
| cell projection | Blast | cellular component |
| neuron projection | Blast | cellular component |
| neuronal cell body | Blast | cellular component |
| extracellular exosome | Blast | cellular component |
| G-protein coupled receptor activity | InterProScan | molecular function |
| G-protein coupled receptor signaling pathway | InterProScan | biological process |
| neuron part | Blast | cellular component |
| cluster of actin-based cell projections | Blast | cellular component |
| macromolecular complex | Blast | cellular component |
| transmembrane signaling receptor activity | Blast | molecular function |
| macromolecular complex binding | Blast | molecular function |
| extracellular region part | Blast | cellular component |
| anion binding | Blast | molecular function |
| carbohydrate derivative binding | Blast | molecular function |
| cytoskeletal protein binding | Blast | molecular function |
| organelle part | Blast | cellular component |
| cell projection part | Blast | cellular component |
| plasma membrane region | Blast | cellular component |
| microtubule organizing center | Blast | cellular component |
| cell projection membrane | Blast | cellular component |
| cell leading edge | Blast | cellular component |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
32 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| photoreceptor inner segment | Hs | cellular component | 94.0 | 5.99e-19 |
| stereocilia ankle link | Hs | cellular component | 94.0 | 5.99e-19 |
| stereocilia ankle link complex | Hs | cellular component | 94.0 | 5.99e-19 |
| phosphoprotein phosphatase activity | Hs | molecular function | 114 | 3.25e-25 |
| protein tyrosine phosphatase activity | Hs | molecular function | 114 | 3.25e-25 |
| transmembrane receptor protein tyrosine phosphatase activity | Hs | molecular function | 96.3 | 8.19e-20 |
| protein binding | Hs | molecular function | 114 | 3.25e-25 |
| collagen binding | Hs | molecular function | 94.0 | 5.99e-19 |
| extracellular region | Hs | cellular component | 94.0 | 5.99e-19 |
| basement membrane | Hs | cellular component | 94.0 | 5.99e-19 |
| cytoplasm | Hs | cellular component | 94.0 | 5.99e-19 |
| plasma membrane | Hs | cellular component | 96.3 | 8.19e-20 |
| integral component of plasma membrane | Hs | cellular component | 96.3 | 8.19e-20 |
| heparin binding | Hs | molecular function | 96.3 | 8.19e-20 |
| membrane | Hs | cellular component | 114 | 3.25e-25 |
| integral component of membrane | Hs | cellular component | 114 | 3.25e-25 |
| apical plasma membrane | Hs | cellular component | 94.0 | 5.99e-19 |
| hydrolase activity | Hs | molecular function | 114 | 3.25e-25 |
| phosphatase activity | Hs | molecular function | 114 | 3.25e-25 |
| myosin binding | Hs | molecular function | 94.0 | 5.99e-19 |
| photoreceptor connecting cilium | Hs | cellular component | 94.0 | 5.99e-19 |
| stereocilium bundle | Hs | cellular component | 114 | 3.25e-25 |
| chondroitin sulfate proteoglycan binding | Hs | molecular function | 96.3 | 8.19e-20 |
| ciliary basal body | Hs | cellular component | 94.0 | 5.99e-19 |
| protein homodimerization activity | Hs | molecular function | 94.0 | 5.99e-19 |
| cell projection | Hs | cellular component | 94.0 | 5.99e-19 |
| neuron projection | Hs | cellular component | 96.3 | 8.19e-20 |
| neuronal cell body | Hs | cellular component | 96.3 | 8.19e-20 |
| stereocilium membrane | Hs | cellular component | 94.0 | 5.99e-19 |
| extracellular exosome | Hs | cellular component | 96.3 | 8.19e-20 |
| periciliary membrane compartment | Hs | cellular component | 94.0 | 5.99e-19 |
| USH2 complex | Hs | cellular component | 94.0 | 5.99e-19 |
GO (InterProScan)
4 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| protein binding | SUPERFAMILY | molecular function | 5.39E-31 |
| integral component of membrane | Pfam | cellular component | 1.5E-5 |
| G-protein coupled receptor activity | Pfam | molecular function | 1.5E-5 |
| G-protein coupled receptor signaling pathway | Pfam | biological process | 1.5E-5 |
