Aniseed - Gene card

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Genoscope Yasuo Villefranche

4 results

AHC0AAA169YK03

Plate: Plate_169_K03

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
Homeobox_dom	ProSiteProfiles	Homeobox domain
Homeobox_dom	SMART	Homeobox domain
SIX1_SD	Pfam	Homeobox protein SIX1, N-terminal SD domain
Homeobox_dom	CDD	Homeobox domain
Homeobox_dom	Pfam	Homeobox domain
Homeobox-like_sf	SUPERFAMILY	Homeobox-like domain superfamily

GOSlim

37 results

GO Term	Annotation Origin	Type
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Blast	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
DNA binding	Orthology	molecular function
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
transcription coactivator activity	Orthology	molecular function
receptor binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
regulation of transcription from RNA polymerase II promoter	Orthology	biological process
transcription from RNA polymerase II promoter	Orthology	biological process
multicellular organism development	Orthology	biological process
brain development	Orthology	biological process
visual perception	Orthology	biological process
transcription factor binding	Orthology	molecular function
cell proliferation	Orthology	biological process
anatomical structure morphogenesis	Orthology	biological process
cell migration	Orthology	biological process
negative regulation of Wnt signaling pathway	Orthology	biological process
regulation of cell proliferation	Orthology	biological process
sequence-specific DNA binding	Orthology	molecular function
macromolecular complex binding	Blast	molecular function
negative regulation of transcription, DNA-templated	Orthology	biological process
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
RNA polymerase II regulatory region sequence-specific DNA binding	Orthology	molecular function
animal organ development	Orthology	biological process
cell development	Orthology	biological process
intracellular protein transport	Orthology	biological process
establishment of protein localization to organelle	Orthology	biological process
generation of neurons	Orthology	biological process
enzyme binding	Orthology	molecular function
neuron differentiation	Orthology	biological process
cell differentiation	Orthology	biological process
cell division	Orthology	biological process
anatomical structure development	Orthology	biological process
apoptotic process	Orthology	biological process

GO (Orthology)

48 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
protein import into nucleus, translocation	Hs	biological process
RNA polymerase II distal enhancer sequence-specific DNA binding	Hs	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding	Hs	molecular function
transcription corepressor binding	Hs	molecular function
eye development	Hs	biological process
epithelial cell maturation	Hs	biological process
lens development in camera-type eye	Hs	biological process
optic vesicle morphogenesis	Hs	biological process
DNA binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding	Hs	molecular function
transcription coactivator activity	Hs	molecular function
receptor binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
transcription from RNA polymerase II promoter	Hs	biological process
protein import into nucleus	Hs	biological process
multicellular organism development	Hs	biological process
brain development	Hs	biological process
visual perception	Hs	biological process
animal organ morphogenesis	Hs	biological process
proximal/distal axis specification	Hs	biological process
neuroblast differentiation	Hs	biological process
diencephalon development	Hs	biological process
telencephalon development	Hs	biological process
forebrain anterior/posterior pattern specification	Hs	biological process
forebrain dorsal/ventral pattern formation	Hs	biological process
cell proliferation in forebrain	Hs	biological process
pituitary gland development	Hs	biological process
negative regulation of Wnt signaling pathway	Hs	biological process
regulation of cell proliferation	Hs	biological process
histone deacetylase binding	Hs	molecular function
camera-type eye development	Hs	biological process
sequence-specific DNA binding	Hs	molecular function
negative regulation of neuron differentiation	Hs	biological process
negative regulation of transcription, DNA-templated	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
circadian behavior	Hs	biological process
regulation of neural retina development	Hs	biological process
lens fiber cell differentiation	Hs	biological process
neuroblast migration	Hs	biological process
regulation of neuroblast proliferation	Hs	biological process
apoptotic process involved in development	Hs	biological process
regulation of neural precursor cell proliferation	Hs	biological process

GO (Blast)

17 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	268	3.93e-88
RNA polymerase II distal enhancer sequence-specific DNA binding	Hs	molecular function	328	5.09e-111
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	328	5.09e-111
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	268	3.93e-88
transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding	Hs	molecular function	328	5.09e-111
transcription corepressor binding	Hs	molecular function	328	5.09e-111
DNA binding	Hs	molecular function	328	5.09e-111
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	328	5.09e-111
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding	Hs	molecular function	328	5.09e-111
transcription coactivator activity	Hs	molecular function	328	5.09e-111
receptor binding	Hs	molecular function	328	5.09e-111
protein binding	Hs	molecular function	328	5.09e-111
nucleus	Hs	cellular component	328	5.09e-111
transcription factor binding	Hs	molecular function	268	3.93e-88
histone deacetylase binding	Hs	molecular function	328	5.09e-111
sequence-specific DNA binding	Hs	molecular function	328	5.09e-111
macromolecular complex binding	Hs	molecular function	268	3.93e-88

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
DNA binding	SUPERFAMILY	molecular function	3.51E-16

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