Login
Help

GENE CARD

Submit your Data

  1. Gene 'Phmamm.CG.MTP2014.S1...'

Gene Card

Species

P.mammillata

Unique Gene ID

Phmamm.g00003275

Gene Model ID

Phmamm.CG.MTP2014.S104.g03275

Location

S104:152756..153448

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S104.g03275.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

6 results

AHC0AAA36YJ07

Plate: Plate_36_J07

AHC0AAA120YO24

Plate: Plate_120_O24

AHC0AAA150YK19

Plate: Plate_150_K19

AHC0AAA174YA17

Plate: Plate_174_A17

AHC0AAA251YF02

Plate: Plate_251_F02

AHC0AAA260YD10

Plate: Plate_260_D10

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
bHLH_dom ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain
DNA-bd_prot-inh PANTHER DNA-binding protein inhibitor
HLH_DNA-bd_sf SUPERFAMILY Helix-loop-helix DNA-binding domain superfamily
bHLH_dom SMART Myc-type, basic helix-loop-helix (bHLH) domain
HLH_DNA-bd_sf Gene3D Helix-loop-helix DNA-binding domain superfamily

GOSlim

4 results

GO Term Annotation Origin Type
nucleus InterProScan cellular component
cytoplasm InterProScan cellular component
negative regulation of transcription, DNA-templated InterProScan biological process
protein dimerization activity InterProScan molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value

GO (InterProScan)

4 results

GO Term Analysis Type e-value
nucleus PANTHER cellular component 8.3E-13
cytoplasm PANTHER cellular component 8.3E-13
negative regulation of transcription, DNA-templated PANTHER biological process 8.3E-13
protein dimerization activity SUPERFAMILY molecular function 7.33E-8