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GENE CARD

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Gene Card

Best human hits

SORBS1; SORBS2; SORBS3

Species

P.mammillata

Unique Gene ID

Phmamm.g00013325

Gene Model ID

Phmamm.CG.MTP2014.S1024.g13325

Location

S1024:54646..57363

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S1024.g13325.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

6 results

AHC0AAA80YG05

Plate: Plate_80_G05

AHC0AAA100YM21

Plate: Plate_100_M21

AHC0AAA115YB12

Plate: Plate_115_B12

AHC0AAA196YD19

Plate: Plate_196_D19

AHC0AAA210YF14

Plate: Plate_210_F14

AHC0AAA211YF14

Plate: Plate_211_F14

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
SH3-like_dom_sf SUPERFAMILY SH3-like domain superfamily
Sorbin_SH3 PANTHER Sorbin and SH3 domain-containing protein
SH3_domain SMART SH3 domain
SH3_domain ProSiteProfiles SH3 domain
SH3_domain PRINTS SH3 domain
SH3_domain Pfam SH3 domain

GOSlim

39 results

GO Term Annotation Origin Type
negative regulation of transcription from RNA polymerase II promoter Orthology biological process
nucleic acid binding Blast molecular function
RNA binding Blast molecular function
actin binding Blast molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Blast cellular component
cytoplasm Orthology cellular component
centrosome Blast cellular component
cytosol Orthology cellular component
cytoskeleton Orthology cellular component
plasma membrane Blast cellular component
adherens junction Blast cellular component
cell-substrate adherens junction Blast cellular component
focal adhesion Orthology cellular component
cell adhesion Orthology biological process
cytoskeletal protein binding Orthology molecular function
transcription factor binding Orthology molecular function
positive regulation of signal transduction Orthology biological process
membrane Blast cellular component
apical plasma membrane Blast cellular component
lamellipodium Blast cellular component
cell junction Orthology cellular component
cell projection Blast cellular component
membrane raft Blast cellular component
perinuclear region of cytoplasm Blast cellular component
organelle organization Orthology biological process
structural molecule activity Orthology molecular function
intracellular signal transduction Orthology biological process
protein phosphorylation Orthology biological process
cytoskeletal part Blast cellular component
receptor binding Blast molecular function
macromolecular complex binding Blast molecular function
integral component of plasma membrane Blast cellular component
macromolecular complex Blast cellular component
nuclear lumen Blast cellular component
organelle part Blast cellular component
cytoplasmic part Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component

GO (Orthology)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
structural constituent of cytoskeleton Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
cytoskeleton Hs cellular component
focal adhesion Hs cellular component
muscle contraction Hs biological process
actin filament organization Hs biological process
cell adhesion Hs biological process
transcription factor binding Hs molecular function
vinculin binding Hs molecular function
cell junction Hs cellular component
cell-substrate adhesion Hs biological process
positive regulation of MAPK cascade Hs biological process
positive regulation of cytoskeleton organization Hs biological process
positive regulation of stress fiber assembly Hs biological process

GO (Blast)

36 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
stress fiber Hs cellular component 122 3.21e-31
nucleic acid binding Hs molecular function 120 5.95e-31
RNA binding Hs molecular function 120 5.95e-31
actin binding Hs molecular function 122 3.21e-31
SH3/SH2 adaptor activity Hs molecular function 122 3.21e-31
insulin receptor binding Hs molecular function 122 3.21e-31
structural constituent of cytoskeleton Hs molecular function 120 5.95e-31
protein binding Hs molecular function 122 3.21e-31
nucleus Hs cellular component 122 3.21e-31
nucleoplasm Hs cellular component 120 5.95e-31
cytoplasm Hs cellular component 122 3.21e-31
centrosome Hs cellular component 122 3.21e-31
cytosol Hs cellular component 122 3.21e-31
cytoskeleton Hs cellular component 122 3.21e-31
plasma membrane Hs cellular component 122 3.21e-31
insulin receptor complex Hs cellular component 122 3.21e-31
adherens junction Hs cellular component 122 3.21e-31
cell-cell adherens junction Hs cellular component 122 3.21e-31
zonula adherens Hs cellular component 122 3.21e-31
cell-substrate adherens junction Hs cellular component 122 3.21e-31
focal adhesion Hs cellular component 122 3.21e-31
cytoskeletal protein binding Hs molecular function 122 3.21e-31
cytoskeletal adaptor activity Hs molecular function 120 5.95e-31
transcription factor binding Hs molecular function 116 1.60e-29
structural constituent of muscle Hs molecular function 120 5.95e-31
actin cytoskeleton Hs cellular component 120 5.95e-31
membrane Hs cellular component 122 3.21e-31
apical plasma membrane Hs cellular component 120 5.95e-31
nuclear matrix Hs cellular component 122 3.21e-31
vinculin binding Hs molecular function 116 1.60e-29
Z disc Hs cellular component 120 5.95e-31
lamellipodium Hs cellular component 120 5.95e-31
cell junction Hs cellular component 122 3.21e-31
cell projection Hs cellular component 120 5.95e-31
membrane raft Hs cellular component 122 3.21e-31
perinuclear region of cytoplasm Hs cellular component 120 5.95e-31

GO (InterProScan)

2 results

GO Term Analysis Type e-value
protein binding SUPERFAMILY molecular function 5.38E-18
actin filament organization PANTHER biological process 7.5E-39