Aniseed - Gene card

External Database Gene Card

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WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

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Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
RRM_dom	SMART	RNA recognition motif domain
RRM_dom	Pfam	RNA recognition motif domain
RBD_domain_sf	SUPERFAMILY	RNA-binding domain superfamily
Nucleotide-bd_a/b_plait_sf	Gene3D	Nucleotide-binding alpha-beta plait domain superfamily
RRM_dom	ProSiteProfiles	RNA recognition motif domain

GOSlim

24 results

GO Term	Annotation Origin	Type
mRNA splicing, via spliceosome	Orthology	biological process
nucleic acid binding	Orthology	molecular function
transcription corepressor activity	Orthology	molecular function
RNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
mRNA processing	Orthology	biological process
RNA splicing	Orthology	biological process
nuclear speck	Orthology	cellular component
unfolded protein binding	Blast	molecular function
extracellular exosome	Orthology	cellular component
negative regulation of nucleic acid-templated transcription	Orthology	biological process
regulation of gene expression	Orthology	biological process
protein kinase binding	Orthology	molecular function
nuclear part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
transcription from RNA polymerase II promoter	Orthology	biological process
organic substance transport	Orthology	biological process
intracellular transport	Orthology	biological process
intracellular protein transport	Orthology	biological process
gene expression	Orthology	biological process
nuclear body	Orthology	cellular component

GO (Orthology)

24 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
mitotic cell cycle	Hs	biological process
regulation of alternative mRNA splicing, via spliceosome	Hs	biological process
mRNA splicing, via spliceosome	Hs	biological process
nucleic acid binding	Hs	molecular function
transcription corepressor activity	Hs	molecular function
RNA binding	Hs	molecular function
protein kinase C binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
spliceosomal complex	Hs	cellular component
cytosol	Hs	cellular component
termination of RNA polymerase II transcription	Hs	biological process
mRNA processing	Hs	biological process
RNA export from nucleus	Hs	biological process
mRNA export from nucleus	Hs	biological process
RNA splicing	Hs	biological process
nuclear speck	Hs	cellular component
mRNA 3'-end processing	Hs	biological process
interchromatin granule	Hs	cellular component
pre-mRNA binding	Hs	molecular function
regulation of RNA splicing	Hs	biological process
extracellular exosome	Hs	cellular component
negative regulation of nucleic acid-templated transcription	Hs	biological process

GO (Blast)

15 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleic acid binding	Hs	molecular function	160	8.02e-50
transcription corepressor activity	Hs	molecular function	160	8.02e-50
RNA binding	Hs	molecular function	160	8.02e-50
protein kinase C binding	Hs	molecular function	160	8.02e-50
protein binding	Hs	molecular function	160	8.02e-50
nucleus	Hs	cellular component	160	8.02e-50
nucleoplasm	Hs	cellular component	160	8.02e-50
spliceosomal complex	Hs	cellular component	160	8.02e-50
cytosol	Hs	cellular component	160	8.02e-50
nuclear speck	Hs	cellular component	160	8.02e-50
interchromatin granule	Hs	cellular component	160	8.02e-50
pre-mRNA binding	Hs	molecular function	160	8.02e-50
RS domain binding	Hs	molecular function	80.9	1.07e-18
unfolded protein binding	Hs	molecular function	80.9	1.07e-18
extracellular exosome	Hs	cellular component	160	8.02e-50

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
nucleic acid binding	SUPERFAMILY	molecular function	2.42E-31

Gene Card

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