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GENE CARD

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Gene Card

Best human hits

ANKS3; BICC1; WASHC5

Species

P.fumigata

Unique Gene ID

Phfumi.g00002934

Gene Model ID

Phfumi.CG.MTP2014.S896.g02934

Location

S896:22997..29186

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
WASH_strumpellin Pfam WASH complex, subunit strumpellin
WASH_strumpellin PANTHER WASH complex, subunit strumpellin
SAM ProSiteProfiles Sterile alpha motif domain
SAM SMART Sterile alpha motif domain
SAM/pointed_sf SUPERFAMILY Sterile alpha motif/pointed domain superfamily
SAM Pfam Sterile alpha motif domain

GOSlim

13 results

GO Term Annotation Origin Type
nucleic acid binding Blast molecular function
RNA binding Blast molecular function
protein binding Orthology molecular function
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
endosome Blast cellular component
early endosome Blast cellular component
endoplasmic reticulum Blast cellular component
cytosol Blast cellular component
neuron projection Blast cellular component
neuronal cell body Blast cellular component
cytoplasmic part Blast cellular component
macromolecular complex Blast cellular component

GO (Orthology)

1 result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein binding Hs molecular function

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleic acid binding Hs molecular function 62.8 4.31e-10
RNA binding Hs molecular function 62.8 4.31e-10
protein binding Hs molecular function 478 6.66e-156
nucleoplasm Hs cellular component 478 6.66e-156
cytoplasm Hs cellular component 478 6.66e-156
endosome Hs cellular component 478 6.66e-156
early endosome Hs cellular component 478 6.66e-156
endoplasmic reticulum Hs cellular component 478 6.66e-156
cytosol Hs cellular component 478 6.66e-156
neuron projection Hs cellular component 478 6.66e-156
neuronal cell body Hs cellular component 478 6.66e-156
WASH complex Hs cellular component 478 6.66e-156

GO (InterProScan)

2 results

GO Term Analysis Type e-value
protein binding Pfam molecular function 8.2E-11
WASH complex PANTHER cellular component 1.5E-153