Aniseed - Gene card

Gene Card

Best human hits

DMRT1; DMRTA1; DMRTA2

Species

P.fumigata

Unique Gene ID

Phfumi.g00007526

Gene Model ID

Phfumi.CG.MTP2014.S6850.g07526

Location

S6850:1701..5645

Transcript Models and Sequences

Phfumi.CG.MTP2014.S6850.g07526.01.t
Phfumi.CG.MTP2014.S6850.g07526.02.t
Phfumi.CG.MTP2014.S6850.g07526.03.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
DMA	Pfam	DMRTA motif
DM_DNA-bd_sf	Gene3D	DM DNA-binding domain superfamily
DM_DNA-bd	ProSitePatterns	DM DNA-binding domain
DM_DNA-bd	ProSiteProfiles	DM DNA-binding domain
DMRT/dsx/mab-3	PANTHER	DMRT/protein doublesex/protein male abnormal 3
DM_DNA-bd	SMART	DM DNA-binding domain
DM_DNA-bd_sf	SUPERFAMILY	DM DNA-binding domain superfamily
DM_DNA-bd	Pfam	DM DNA-binding domain

GOSlim

16 results

GO Term	Annotation Origin	Type
RNA polymerase II regulatory region sequence-specific DNA binding	Blast	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Blast	molecular function
core promoter proximal region sequence-specific DNA binding	Blast	molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Blast	molecular function
DNA binding	Blast	molecular function
chromatin binding	Blast	molecular function
transcription factor activity, sequence-specific DNA binding	Blast	molecular function
protein binding	Blast	molecular function
nucleus	Blast	cellular component
cytoplasm	Blast	cellular component
regulation of transcription, DNA-templated	InterProScan	biological process
identical protein binding	Blast	molecular function
protein homodimerization activity	Blast	molecular function
sequence-specific DNA binding	Blast	molecular function
metal ion binding	Blast	molecular function
protein heterodimerization activity	Blast	molecular function

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

15 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function	116	2.48e-28
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	168	4.06e-45
core promoter proximal region sequence-specific DNA binding	Hs	molecular function	116	2.48e-28
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	116	2.48e-28
DNA binding	Hs	molecular function	168	4.06e-45
chromatin binding	Hs	molecular function	116	2.48e-28
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	168	4.06e-45
protein binding	Hs	molecular function	168	4.06e-45
nucleus	Hs	cellular component	168	4.06e-45
cytoplasm	Hs	cellular component	116	2.48e-28
identical protein binding	Hs	molecular function	116	2.48e-28
protein homodimerization activity	Hs	molecular function	168	4.06e-45
sequence-specific DNA binding	Hs	molecular function	168	4.06e-45
metal ion binding	Hs	molecular function	168	4.06e-45
protein heterodimerization activity	Hs	molecular function	168	4.06e-45

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
transcription factor activity, sequence-specific DNA binding	PANTHER	molecular function	5.1E-65
nucleus	PANTHER	cellular component	5.1E-65
regulation of transcription, DNA-templated	PANTHER	biological process	5.1E-65
sequence-specific DNA binding	SMART	molecular function	5.8E-28